RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ZNF585BQ52M93 769 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 VWC2Q2TAL6 325 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 DRAM1Q8N682 238 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 GNG12Q9UBI6 72 aa12.91□□□□□ -0.34
RTN1-209ENST00000611068 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
RTN1-209ENST00000611068 CENPWQ5EE01 88 aa12.9□□□□□ -0.34
RTN1-209ENST00000611068 OR5A1Q8NGJ0 315 aa12.9□□□□□ -0.34
RTN1-209ENST00000611068 C5orf30Q96GV9 206 aa12.9□□□□□ -0.34
RTN1-209ENST00000611068 C19orf84I3L1E1 186 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 MGST3O14880 152 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 TSPAN13O95857 204 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.35
RTN1-209ENST00000611068 SPINK9Q5DT21 86 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 BPIFA4PQ86YQ2 179 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 ZNRD1Q9P1U0 126 aa12.9□□□□□ -0.35
RTN1-209ENST00000611068 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 FBXL19-AS1Q494R0 122 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 ZDHHC16Q969W1 377 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 C9JCJ5 164 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 ISLRO14498 428 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 SSX8Q7RTT4 187 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
RTN1-209ENST00000611068 SPINT2O43291 252 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 FCN3O75636 299 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 ZNF134P52741 427 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 RPL30P62888 115 aaKnown RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 COX19Q49B96 90 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 H1FXQ92522 213 aaKnown RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 FAM168AQ92567 244 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 TRGV10A0A0A0MS01 117 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 REG1BP48304 166 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 ZNF816Q0VGE8 651 aaPredicted RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 ZNF672Q499Z4 452 aaPredicted RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 ADAMTSL5Q6ZMM2 481 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 RAB1CQ92928 201 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 ZNF331Q9NQX6 463 aaPredicted RBP12.88□□□□□ -0.35
RTN1-209ENST00000611068 ZNF462Q96JM2 2506 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
RTN1-209ENST00000611068 KLF5Q13887 457 aaPredicted RBP12.87□□□□□ -0.35
RTN1-209ENST00000611068 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 USP9XQ93008 2570 aaPredicted RBP12.87□□□□□ -0.35
RTN1-209ENST00000611068 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 SMIM27A0A1W2PRY6 76 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 COX8AP10176 69 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 GNG4P50150 75 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 DLX1P56177 255 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 ITLN2Q8WWU7 325 aaPredicted RBP12.87□□□□□ -0.35
RTN1-209ENST00000611068 C1RLQ9NZP8 487 aa12.87□□□□□ -0.35
RTN1-209ENST00000611068 VPS13CQ709C8 3753 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 A6NDN8 102 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 RBMXL2O75526 392 aaKnown RBP12.86□□□□□ -0.35
RTN1-209ENST00000611068 CD24P25063 80 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 HERV-K104P63124 156 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 Q8TCH9 128 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 B9A039 149 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 CCL3L1P16619 93 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
RTN1-209ENST00000611068 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 PSG8Q9UQ74 426 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 HCFC1P51610 2035 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 CSMD2Q7Z408 3487 aa12.86□□□□□ -0.35
RTN1-209ENST00000611068 FOXH1O75593 365 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
RTN1-209ENST00000611068 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 IZUMO1RA6ND01 250 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 NPIPB11E5RHQ5 1161 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
RTN1-209ENST00000611068 MFAP2P55001 183 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
RTN1-209ENST00000611068 C11orf52Q96A22 123 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
RTN1-209ENST00000611068 TMEM8BA6NDV4 472 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 LINC00473A8K010 186 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 C17orf98A8MV24 154 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 BRI3O95415 125 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 CXorf1O96002 111 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 TCTAP57738 103 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
RTN1-209ENST00000611068 SPAG8Q99932 426 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms