RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 OR1B1Q8NGR6 318 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 DCANP1Q8TF63 244 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 MGST2Q99735 147 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 MAP6D1Q9H9H5 199 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 HELTA6NFD8 242 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 K7EQG2 157 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 AGPAT2O15120 278 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 MPC2O95563 127 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 CFDP00746 253 aaPredicted RBP14.88□□□□□ -0.03
SSBP4-210ENST00000601444 OXA1LQ15070 435 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 SIGLEC15Q6ZMC9 328 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 STX12Q86Y82 276 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 PPP1R14BQ96C90 147 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 TM2D3Q9BRN9 247 aa14.88□□□□□ -0.03
SSBP4-210ENST00000601444 TRAV2A0A0B4J234 112 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 LINC00869P0C866 280 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 S100A11P31949 105 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 EWSR1Q01844 656 aaKnown RBP eCLIP14.87□□□□□ -0.03
SSBP4-210ENST00000601444 VWC2Q2TAL6 325 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 FAM110AQ9BQ89 295 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 MED28Q9H204 178 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 UQCC1Q9NVA1 299 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 SLC45A2Q9UMX9 530 aa14.87□□□□□ -0.03
SSBP4-210ENST00000601444 AP2S1P53680 142 aaPredicted RBP14.86□□□□□ -0.03
SSBP4-210ENST00000601444 DEFB131AP59861 70 aa14.86□□□□□ -0.03
SSBP4-210ENST00000601444 SELENOTP62341 195 aa14.86□□□□□ -0.03
SSBP4-210ENST00000601444 LEMD1Q68G75 181 aa14.86□□□□□ -0.03
SSBP4-210ENST00000601444 U3KQK5 164 aa14.86□□□□□ -0.03
SSBP4-210ENST00000601444 LOC102724200A0A096LPH7 203 aaPredicted RBP14.85□□□□□ -0.03
SSBP4-210ENST00000601444 UBE2L5PA0A1B0GUS4 154 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 ZNF98A6NK75 572 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 HBG1P69891 147 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 HBG2P69892 147 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 PATE2Q6UY27 113 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 TMEM147Q9BVK8 224 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 ARL6Q9H0F7 186 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 SLC25A22Q9H936 323 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 RETNQ9HD89 108 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 PFDN2Q9UHV9 154 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 WDR83OSQ9Y284 106 aa14.85□□□□□ -0.03
SSBP4-210ENST00000601444 HYPMO75409 117 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 OR5G3P0C626 314 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 ZNF688P0C7X2 276 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 RPL35AP18077 110 aaKnown RBP14.84□□□□□ -0.03
SSBP4-210ENST00000601444 NUP62P37198 522 aaPredicted RBP14.84□□□□□ -0.03
SSBP4-210ENST00000601444 CMC4P56277 68 aaPredicted RBP14.84□□□□□ -0.03
SSBP4-210ENST00000601444 PLP1P60201 277 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 C1orf194Q5T5A4 169 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 OR8I2Q8N0Y5 310 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 OR5C1Q8NGR4 320 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 RCHY1Q96PM5 261 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 UHRF2Q96PU4 802 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 SCRT1Q9BWW7 348 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 GGTLC1Q9BX51 225 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 SLC25A39Q9BZJ4 359 aaPredicted RBP14.84□□□□□ -0.03
SSBP4-210ENST00000601444 SLC25A31Q9H0C2 315 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 SLC25A32Q9H2D1 315 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 ZMAT4Q9H898 229 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 NRN1Q9NPD7 142 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 MBD2Q9UBB5 411 aa14.84□□□□□ -0.03
SSBP4-210ENST00000601444 CAMLGP49069 296 aa14.83□□□□□ -0.04
SSBP4-210ENST00000601444 ATP6V1FQ16864 119 aa14.83□□□□□ -0.04
SSBP4-210ENST00000601444 ZNF546Q86UE3 836 aa14.83□□□□□ -0.04
SSBP4-210ENST00000601444 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
SSBP4-210ENST00000601444 H3BRN7 92 aa14.82□□□□□ -0.04
SSBP4-210ENST00000601444 BAXQ07812 192 aa14.82□□□□□ -0.04
SSBP4-210ENST00000601444 MIC13Q5XKP0 118 aa14.82□□□□□ -0.04
SSBP4-210ENST00000601444 C17orf77Q96MU5 243 aa14.82□□□□□ -0.04
SSBP4-210ENST00000601444 FBXL17Q9UF56 701 aa14.82□□□□□ -0.04
SSBP4-210ENST00000601444 PET100P0DJ07 73 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 FGF7P21781 194 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 RAP2BP61225 183 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 CLINT1Q14677 625 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 Q5BKY6 102 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 THAP6Q8TBB0 222 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 SPATA25Q9BR10 227 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 SHANK2-AS3Q9BTD1 123 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 ARV1Q9H2C2 271 aa14.81□□□□□ -0.04
SSBP4-210ENST00000601444 LYL1P12980 280 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 RPL12P30050 165 aaKnown RBP14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PRR20EP86478 221 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PRR20CP86479 221 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PRR20DP86480 221 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PRR20BP86481 221 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PRR20AP86496 221 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 RAB31Q13636 194 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 PSMG4Q5JS54 123 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 TMEM37Q8WXS4 190 aa14.8□□□□□ -0.04
SSBP4-210ENST00000601444 KNCNA6PVL3 124 aa14.79□□□□□ -0.04
SSBP4-210ENST00000601444 OPCMLQ14982 345 aa14.79□□□□□ -0.04
SSBP4-210ENST00000601444 RSG1Q9BU20 258 aa14.79□□□□□ -0.04
SSBP4-210ENST00000601444 HSPB11Q9Y547 144 aa14.79□□□□□ -0.04
SSBP4-210ENST00000601444 NBEAL2Q6ZNJ1 2754 aa14.78□□□□□ -0.04
SSBP4-210ENST00000601444 SOCS3O14543 225 aa14.78□□□□□ -0.04
SSBP4-210ENST00000601444 MORN5Q5VZ52 161 aa14.78□□□□□ -0.04
SSBP4-210ENST00000601444 LINC00305Q7Z4B0 112 aa14.78□□□□□ -0.04
SSBP4-210ENST00000601444 SMIM3Q9BZL3 60 aa14.78□□□□□ -0.04
SSBP4-210ENST00000601444 COX7A2P2O60397 106 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 GALR1P47211 349 aa14.77□□□□□ -0.05
SSBP4-210ENST00000601444 RPL29P47914 159 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms