RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 A0A1B0GUS0 222 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 NDUFA4O00483 81 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 CXorf1O96002 111 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 C8orf88P0DMB2 117 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 COMMD7Q86VX2 200 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 WFDC12Q8WWY7 111 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 ZFAND3Q9H8U3 227 aa17.4■□□□□ 0.38
IRF3-228ENST00000601291 C4orf3Q8WVX3 66 aa17.39■□□□□ 0.37
IRF3-228ENST00000601291 SLC25A39Q9BZJ4 359 aaPredicted RBP17.39■□□□□ 0.37
IRF3-228ENST00000601291 RABAC1Q9UI14 185 aa17.39■□□□□ 0.37
IRF3-228ENST00000601291 PROK1P58294 105 aa17.38■□□□□ 0.37
IRF3-228ENST00000601291 IQCF2Q8IXL9 164 aa17.38■□□□□ 0.37
IRF3-228ENST00000601291 MARC2Q969Z3 335 aa17.38■□□□□ 0.37
IRF3-228ENST00000601291 ZNF414Q96IQ9 312 aa17.38■□□□□ 0.37
IRF3-228ENST00000601291 ARL14EPLP0DKL9 152 aa17.37■□□□□ 0.37
IRF3-228ENST00000601291 PQLC2Q6ZP29 291 aa17.37■□□□□ 0.37
IRF3-228ENST00000601291 RNF24Q9Y225 148 aa17.37■□□□□ 0.37
IRF3-228ENST00000601291 H3BRN7 92 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 I3L521 148 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 OR7C2O60412 319 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 CD28P10747 220 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 CCL20P78556 96 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 RPEL1Q2QD12 228 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 MORN5Q5VZ52 161 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 STXBP6Q8NFX7 210 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 SHANK2-AS3Q9BTD1 123 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 C20orf24Q9BUV8 137 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 SLC25A2Q9BXI2 301 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 HSPB1P04792 205 aaKnown RBP17.36■□□□□ 0.37
IRF3-228ENST00000601291 PSMB3P49720 205 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 FAM106AQ4KMX7 169 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 SLC7A5P1Q8MH63 180 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 KLHL30-AS1Q8NEE0 82 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 METTL26Q96S19 204 aa17.36■□□□□ 0.37
IRF3-228ENST00000601291 IGHV3OR16-8A0A075B7F1 116 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 TRAV5A0A0B4J249 113 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 RAB19A4D1S5 217 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 IFNA1P01562 189 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 PPT1P50897 306 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 C11orf44Q8N8P7 122 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 SCRT1Q9BWW7 348 aa17.35■□□□□ 0.37
IRF3-228ENST00000601291 TSSC4Q9Y5U2 329 aaPredicted RBP17.35■□□□□ 0.37
IRF3-228ENST00000601291 GCHFRP30047 84 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 GPHB5Q86YW7 130 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.34■□□□□ 0.37
IRF3-228ENST00000601291 TMEM190Q8WZ59 177 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 FAM167A-AS1Q96KT0 104 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 FAM210AQ96ND0 272 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 GNG13Q9P2W3 67 aa17.34■□□□□ 0.37
IRF3-228ENST00000601291 IGHV4OR15-8A0A075B7B6 117 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 A0A087WW49 117 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 ZP3P21754 424 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 NPPCP23582 126 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 FOXL1Q12952 345 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 TMPRSS5Q9H3S3 457 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 TMEM167BQ9NRX6 74 aa17.33■□□□□ 0.37
IRF3-228ENST00000601291 ZNF320A2RRD8 509 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 ZNF98A6NK75 572 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 LEMD1Q68G75 181 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 UNQ9165/PRO28630Q6UXU0 137 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 C18orf65Q6ZTR6 163 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 NARS2Q96I59 477 aaKnown RBP17.32■□□□□ 0.36
IRF3-228ENST00000601291 CITED2Q99967 270 aaPredicted RBP17.32■□□□□ 0.36
IRF3-228ENST00000601291 PAXXQ9BUH6 204 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 OR51M1Q9H341 326 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 MANBALQ9NQG1 85 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 UBE2L3P68036 154 aaKnown RBP17.32■□□□□ 0.36
IRF3-228ENST00000601291 PMS2P11Q13670 270 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 DPF1Q92782 380 aa17.32■□□□□ 0.36
IRF3-228ENST00000601291 EIF5A2Q9GZV4 153 aaKnown RBP17.32■□□□□ 0.36
IRF3-228ENST00000601291 LINC01619G3V211 115 aa17.31■□□□□ 0.36
IRF3-228ENST00000601291 GUK1Q16774 197 aa17.31■□□□□ 0.36
IRF3-228ENST00000601291 TOR2AQ5JU69 321 aa17.31■□□□□ 0.36
IRF3-228ENST00000601291 BPIFA4PQ86YQ2 179 aa17.31■□□□□ 0.36
IRF3-228ENST00000601291 EIF4E3Q8N5X7 224 aaKnown RBP17.31■□□□□ 0.36
IRF3-228ENST00000601291 ZNF503Q96F45 646 aa17.31■□□□□ 0.36
IRF3-228ENST00000601291 RBFOX3A6NFN3 312 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 OR10J4P0C629 311 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 CRYBB3P26998 211 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 HOXD3P31249 432 aaPredicted RBP17.3■□□□□ 0.36
IRF3-228ENST00000601291 TAGLN2P37802 199 aaKnown RBP17.3■□□□□ 0.36
IRF3-228ENST00000601291 HAGHQ16775 308 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 DEFB136Q30KP8 78 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 UQCC3Q6UW78 93 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 OR11H1Q8NG94 326 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 OR1N2Q8NGR9 330 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 CITED4Q96RK1 184 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 DAZ1Q9NQZ3 744 aaKnown RBP17.3■□□□□ 0.36
IRF3-228ENST00000601291 TMEM14CQ9P0S9 112 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 UFC1Q9Y3C8 167 aa17.3■□□□□ 0.36
IRF3-228ENST00000601291 ZNF207O43670 478 aaKnown RBP17.29■□□□□ 0.36
IRF3-228ENST00000601291 PYYP10082 97 aa17.29■□□□□ 0.36
IRF3-228ENST00000601291 BCL2P10415 239 aa17.29■□□□□ 0.36
IRF3-228ENST00000601291 GP9P14770 177 aa17.29■□□□□ 0.36
IRF3-228ENST00000601291 C8orf86Q6ZUL3 223 aa17.29■□□□□ 0.36
IRF3-228ENST00000601291 A0A1W2PRX2 142 aa17.28■□□□□ 0.36
IRF3-228ENST00000601291 REC114Q7Z4M0 266 aa17.28■□□□□ 0.36
IRF3-228ENST00000601291 C1QL4Q86Z23 238 aa17.28■□□□□ 0.36
IRF3-228ENST00000601291 K7EMT4 169 aa17.28■□□□□ 0.36
IRF3-228ENST00000601291 RPL7P18124 248 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms