RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 RPUSD1Q9UJJ7 312 aaKnown RBP12.48□□□□□ -0.41
IRF3-219ENST00000597636 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.48□□□□□ -0.41
IRF3-219ENST00000597636 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 TMEM97Q5BJF2 176 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 PERPQ96FX8 193 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 SAP30O75446 220 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 ORM2P19652 201 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
IRF3-219ENST00000597636 HAX1O00165 279 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 HTR1DP28221 377 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 SPTA1P02549 2419 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 SNAI2O43623 268 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 APOA2P02652 100 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 APOHP02749 345 aaPredicted RBP12.47□□□□□ -0.41
IRF3-219ENST00000597636 CSN3P07498 182 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 FAM222BQ8WU58 562 aa12.47□□□□□ -0.41
IRF3-219ENST00000597636 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
IRF3-219ENST00000597636 DSCAMO60469 2012 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 TCRAP04437 139 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 SUB1P53999 127 aaKnown RBP eCLIP12.46□□□□□ -0.41
IRF3-219ENST00000597636 VHLLQ6RSH7 139 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 ZCCHC24Q8N2G6 241 aaKnown RBP12.46□□□□□ -0.41
IRF3-219ENST00000597636 FER1L6-AS1Q8NA97 138 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 FER1L6-AS2Q96M78 137 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 MRPL20Q9BYC9 149 aaKnown RBP12.46□□□□□ -0.41
IRF3-219ENST00000597636 DSCAML1Q8TD84 2053 aa12.46□□□□□ -0.41
IRF3-219ENST00000597636 CGB1A6NKQ9 187 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 TMEM238C9JI98 176 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 SPRY3O43610 288 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 ZNF833PQ6ZTB9 187 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 OR1B1Q8NGR6 318 aa12.46□□□□□ -0.42
IRF3-219ENST00000597636 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.42
IRF3-219ENST00000597636 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 TMEM178AQ8NBL3 297 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 AP5S1Q9NUS5 200 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 COL8A1P27658 744 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 C10orf55Q5SWW7 151 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
IRF3-219ENST00000597636 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 FAM87AP0C7U9 286 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
IRF3-219ENST00000597636 CCL13Q99616 98 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 Q9H3A6 140 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 PIEZO1Q92508 2521 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 C9orf118A6NHY6 69 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 C22orf46C9J442 243 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 OVOL3O00110 214 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 NCR2O95944 276 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 TEX45Q8NA69 505 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 OR5AN1Q8NGI8 311 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
IRF3-219ENST00000597636 H3BRM9 83 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 H3BTX0 84 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 FGF6P10767 208 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 GP9P14770 177 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 FOXC1Q12948 553 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 DKK4Q9UBT3 224 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 CSN1S1P47710 185 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 UQCRFS1P47985 274 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 DEFB109BQ30KR1 87 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
IRF3-219ENST00000597636 DPF1Q92782 380 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
IRF3-219ENST00000597636 G3V4G9 280 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 IGHG3P01860 377 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 OR4A5Q8NH83 315 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 ZNF71Q9NQZ8 489 aaPredicted RBP12.42□□□□□ -0.42
IRF3-219ENST00000597636 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 PCNX1Q96RV3 2341 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 A6NDN8 102 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 PAX2Q02962 417 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 Q86TA4 180 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 FDCSPQ8NFU4 85 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 SLC25A15Q9Y619 301 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 TANC2Q9HCD6 1990 aa12.42□□□□□ -0.42
IRF3-219ENST00000597636 NAV3Q8IVL0 2385 aa12.41□□□□□ -0.42
IRF3-219ENST00000597636 TRAV8-1A0A0A6YYK1 113 aa12.41□□□□□ -0.42
IRF3-219ENST00000597636 GATA4P43694 442 aa12.41□□□□□ -0.42
IRF3-219ENST00000597636 ZNF788Q6ZQV5 615 aa12.41□□□□□ -0.42
IRF3-219ENST00000597636 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms