RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 EDA2RQ9HAV5 297 aa4.87□□□□□ -1.63
SMAD4-203ENST00000585448 CHCHD2Q9Y6H1 151 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-203ENST00000585448 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 NPIPB13A6NJU9 1138 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 NPIPB4C9JG80 1138 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 H3BP45 60 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 SPINK4O60575 86 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 LMX1BO60663 402 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 NCR2O95944 276 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 IGHG1P01857 330 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 IGHMP01871 453 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 FCGR2AP12318 317 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 PPP1CAP62136 330 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 HBBP68871 147 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 SRYQ05066 204 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 RPL18Q07020 188 aaKnown RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 CENPWQ5EE01 88 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 KLF17Q5JT82 389 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 ZNF793Q6ZN11 406 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 DGAT2L6Q6ZPD8 337 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 LINC00173Q6ZV60 143 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 TRPT1Q86TN4 253 aaKnown RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 CIARTQ8N365 385 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 RPRMLQ8N4K4 120 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 MYOZ3Q8TDC0 251 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 RNF138Q8WVD3 245 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 RND1Q92730 232 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 TIMD4Q96H15 378 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 TMEM167BQ9NRX6 74 aa4.86□□□□□ -1.63
SMAD4-203ENST00000585448 COL16A1Q07092 1604 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-203ENST00000585448 VWA8A3KMH1 1905 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 NCKAP5O14513 1909 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 TRAV2A0A0B4J234 112 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 TRAV8-2A0A0B4J237 113 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 TRAV8-4A0A0B4J246 113 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 A0A1W2PR77 199 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 C15orf62A8K5M9 175 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 K7EQS6 105 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 SPRY1O43609 319 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 CRYGAP11844 174 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 BCL3P20749 454 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 GCHFRP30047 84 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 RPS27P42677 84 aaKnown RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 RPS18P62269 152 aaKnown RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 SPANXN5Q5MJ07 72 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 PIK3CD-AS1Q5SR53 167 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 PLPP4Q5VZY2 271 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 RAB42Q8N4Z0 105 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 DCAF4L2Q8NA75 395 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 C15orf53Q8NAA6 179 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 ELSPBP1Q96BH3 223 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 SPRY4Q9C004 299 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 SIRPDQ9H106 197 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 FGF22Q9HCT0 170 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 STARD5Q9NSY2 213 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 ALKBH4Q9NXW9 302 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 PTPRDP23468 1912 aa4.85□□□□□ -1.63
SMAD4-203ENST00000585448 MDC1Q14676 2089 aaKnown RBP4.85□□□□□ -1.63
SMAD4-203ENST00000585448 ANAPC1Q9H1A4 1944 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 OBSL1O75147 1896 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 IGKV1D-42A0A075B6H8 117 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 K7ENP7 123 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 K7ERJ3 54 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 NBR2O15453 112 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 TRACP01848 142 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 IAPPP10997 89 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 POLR2LP62875 67 aaKnown RBP4.84□□□□□ -1.63
SMAD4-203ENST00000585448 KLRB1Q12918 225 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 KISS1Q15726 138 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 FHL5Q5TD97 284 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 ASPHD1Q5U4P2 390 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 FKBP1CQ5VVH2 108 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 SPATA33Q96N06 139 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 SCNM1Q9BWG6 230 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 WDR83OSQ9Y284 106 aa4.84□□□□□ -1.63
SMAD4-203ENST00000585448 PAPPA2Q9BXP8 1791 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 PGLYRP1O75594 196 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 DPM2O94777 84 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 NPYP01303 97 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 LGALS1P09382 135 aaKnown RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 ARL14EPLP0DKL9 152 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 COX7CP15954 63 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 HLA-DMBP28068 263 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 RPL13AP40429 203 aaKnown RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 PSMB2P49721 201 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 EMDP50402 254 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 KRTAP10-11P60412 298 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 PLGLB1Q02325 96 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 CST6Q15828 149 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 GDF5OSQ5U4N7 250 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 Q71RC1 249 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 PDPNQ86YL7 162 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 TMEM86BQ8N661 226 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms