RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 TEPPQ6URK8 271 aa15.33■□□□□ 0.04
PPP4R1-221ENST00000582240 SIGLEC15Q6ZMC9 328 aa15.33■□□□□ 0.04
PPP4R1-221ENST00000582240 PPP1R1CQ8WVI7 109 aa15.33■□□□□ 0.04
PPP4R1-221ENST00000582240 RCHY1Q96PM5 261 aa15.33■□□□□ 0.04
PPP4R1-221ENST00000582240 ZMAT4Q9H898 229 aa15.33■□□□□ 0.04
PPP4R1-221ENST00000582240 LOC102724200A0A096LPH7 203 aaPredicted RBP15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 HELTA6NFD8 242 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 FNDC10F2Z333 226 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 CYCSP99999 105 aaKnown RBP15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 NHLH2Q02577 135 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 FCN2Q15485 313 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 DCANP1Q8TF63 244 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 MGST2Q99735 147 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 RNF126Q9BV68 326 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 GGACTQ9BVM4 153 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 GGTLC1Q9BX51 225 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 COL7A1Q02388 2944 aa15.32■□□□□ 0.04
PPP4R1-221ENST00000582240 AGPAT2O15120 278 aa15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 CFDP00746 253 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 ZNF688P0C7X2 276 aa15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 LINC00869P0C866 280 aa15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 FAM110AQ9BQ89 295 aa15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 SLC25A22Q9H936 323 aa15.31■□□□□ 0.04
PPP4R1-221ENST00000582240 TRAV2A0A0B4J234 112 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 E5RGE8 158 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 MPC2O95563 127 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 EWSR1Q01844 656 aaKnown RBP eCLIP15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 STX12Q86Y82 276 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 TMEM147Q9BVK8 224 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 SCRT1Q9BWW7 348 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 ARL6Q9H0F7 186 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 UQCC1Q9NVA1 299 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 SLC45A2Q9UMX9 530 aa15.3■□□□□ 0.04
PPP4R1-221ENST00000582240 UBE2L5PA0A1B0GUS4 154 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 ZNF98A6NK75 572 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 OR5G3P0C626 314 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 S100A11P31949 105 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 AP2S1P53680 142 aaPredicted RBP15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 CMC4P56277 68 aaPredicted RBP15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 PATE2Q6UY27 113 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 OR8I2Q8N0Y5 310 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 OR11H7Q8NGC8 314 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 SPATA25Q9BR10 227 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 MED28Q9H204 178 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 SLC25A32Q9H2D1 315 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 PFDN2Q9UHV9 154 aa15.29■□□□□ 0.04
PPP4R1-221ENST00000582240 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 HYPMO75409 117 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 SELENOTP62341 195 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 MIC13Q5XKP0 118 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 UHRF2Q96PU4 802 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 HIGD1AQ9Y241 93 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 WDR83OSQ9Y284 106 aa15.28■□□□□ 0.04
PPP4R1-221ENST00000582240 NUP62P37198 522 aaPredicted RBP15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 CAMLGP49069 296 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 BAXQ07812 192 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 VWC2Q2TAL6 325 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 PSMG4Q5JS54 123 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 SLC25A39Q9BZJ4 359 aaPredicted RBP15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 SLC25A31Q9H0C2 315 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
PPP4R1-221ENST00000582240 H3BRN7 92 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 FGF7P21781 194 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 DEFB1P60022 68 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 PLP1P60201 277 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 RAP2BP61225 183 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 HBG1P69891 147 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 HBG2P69892 147 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 CLINT1Q14677 625 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 C1orf194Q5T5A4 169 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 OR5C1Q8NGR4 320 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 C17orf77Q96MU5 243 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 RSG1Q9BU20 258 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 MBD2Q9UBB5 411 aa15.26■□□□□ 0.03
PPP4R1-221ENST00000582240 ATP6V1FQ16864 119 aa15.25■□□□□ 0.03
PPP4R1-221ENST00000582240 ZNF546Q86UE3 836 aa15.25■□□□□ 0.03
PPP4R1-221ENST00000582240 SHANK2-AS3Q9BTD1 123 aa15.25■□□□□ 0.03
PPP4R1-221ENST00000582240 FBXL17Q9UF56 701 aa15.25■□□□□ 0.03
PPP4R1-221ENST00000582240 Q6ZNX1 250 aa15.24■□□□□ 0.03
PPP4R1-221ENST00000582240 THAP6Q8TBB0 222 aa15.24■□□□□ 0.03
PPP4R1-221ENST00000582240 LINC00052Q96N35 136 aa15.24■□□□□ 0.03
PPP4R1-221ENST00000582240 ARV1Q9H2C2 271 aa15.24■□□□□ 0.03
PPP4R1-221ENST00000582240 RAB31Q13636 194 aa15.23■□□□□ 0.03
PPP4R1-221ENST00000582240 Q5BKY6 102 aa15.23■□□□□ 0.03
PPP4R1-221ENST00000582240 ACTL10Q5JWF8 245 aa15.23■□□□□ 0.03
PPP4R1-221ENST00000582240 WWC2-AS2Q96NR7 200 aa15.23■□□□□ 0.03
PPP4R1-221ENST00000582240 SMIM3Q9BZL3 60 aa15.23■□□□□ 0.03
PPP4R1-221ENST00000582240 COX7A2P2O60397 106 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 SNRPCP09234 159 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 RPL12P30050 165 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 GALR1P47211 349 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 APOC4P55056 127 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 OPCMLQ14982 345 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 MORN5Q5VZ52 161 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 IGFL4Q6B9Z1 124 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 TMEM37Q8WXS4 190 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 OVOL2Q9BRP0 275 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 HSPB11Q9Y547 144 aa15.22■□□□□ 0.03
PPP4R1-221ENST00000582240 SOCS3O14543 225 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms