RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 M0QZ24 198 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 TOMM40O96008 361 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 BCL2P10415 239 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 FCGR2BP31994 310 aaPredicted RBP9.76□□□□□ -0.85
SRSF1-204ENST00000581979 PPT1P50897 306 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 YPEL3P61236 119 aaPredicted RBP9.76□□□□□ -0.85
SRSF1-204ENST00000581979 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 KHDC3LQ587J8 217 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 PATE2Q6UY27 113 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 FAM223AQ8IWN6 122 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 OR51G1Q8NGK1 321 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF502Q8TBZ5 544 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 MANBALQ9NQG1 85 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF580Q9UK33 172 aa9.76□□□□□ -0.85
SRSF1-204ENST00000581979 TRBV7-1A0A0A6YYK4 115 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 NUPL2O15504 423 aaKnown RBP9.75□□□□□ -0.85
SRSF1-204ENST00000581979 SFTA3P0C7M3 94 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 C8orf88P0DMB2 117 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 PF4V1P10720 104 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 GPR183P32249 361 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 PLP1P60201 277 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 ICAM4Q14773 271 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 LINC00305Q7Z4B0 112 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 Q8WTZ3 238 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 UHRF2Q96PU4 802 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
SRSF1-204ENST00000581979 OR7C2O60412 319 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 BRI3O95415 125 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 GCHFRP30047 84 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF702PQ9H963 129 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 HIGD1AQ9Y241 93 aa9.74□□□□□ -0.85
SRSF1-204ENST00000581979 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 PAGE4O60829 102 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 HSPB1P04792 205 aaKnown RBP9.73□□□□□ -0.85
SRSF1-204ENST00000581979 IL4P05112 153 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CLEC3BP05452 202 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CFHR3Q02985 330 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 MORN5Q5VZ52 161 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 OR5AU1Q8NGC0 362 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 SLC35B3Q9H1N7 401 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 GNB4Q9HAV0 340 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 APOC3P02656 99 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CTSGP08311 255 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 SRP19P09132 144 aaKnown RBP9.73□□□□□ -0.85
SRSF1-204ENST00000581979 ADCYAP1P18509 176 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CEBPGP53567 150 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 UBE2G2P60604 165 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CCDC140Q96MF4 163 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 TMEM167BQ9NRX6 74 aa9.73□□□□□ -0.85
SRSF1-204ENST00000581979 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 CMYA5Q8N3K9 4069 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 WI2-2373I1.2A0A1W2PRP0 233 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 OR2C1O95371 312 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 SLC35B1P78383 322 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF600Q6ZNG1 722 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF329Q86UD4 541 aa9.72□□□□□ -0.85
SRSF1-204ENST00000581979 A0A0G2JLM5 398 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 TGOLN2O43493 480 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 OR10J4P0C629 311 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 ADMP35318 185 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 RAB9AP51151 201 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 DEFA6Q01524 100 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 CST9LP1Q5W188 147 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 ZNF503Q96F45 646 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 FAM167A-AS1Q96KT0 104 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 OR4F4Q96R69 305 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 ATP6V0BQ99437 205 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 PAXXQ9BUH6 204 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 KLK15Q9H2R5 256 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 OR51M1Q9H341 326 aa9.71□□□□□ -0.85
SRSF1-204ENST00000581979 MRPL27Q9P0M9 148 aaKnown RBP9.71□□□□□ -0.85
SRSF1-204ENST00000581979 PUS1Q9Y606 427 aaKnown RBP eCLIP9.71□□□□□ -0.85
SRSF1-204ENST00000581979 IGHG4P01861 327 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 KIAA0141Q14154 515 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 USF2Q15853 346 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 STXBP6Q8NFX7 210 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 IGHV3-35A0A0C4DH35 117 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 C11orf94C9JXX5 98 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 PPP5D1E7EU14 171 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 PYYP10082 97 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 ARL3P36405 182 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms