RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 ADAMTSL5Q6ZMM2 481 aa17.55■□□□□ 0.4
PTPRM-211ENST00000580170 RPP25LQ8N5L8 163 aaKnown RBP17.55■□□□□ 0.4
PTPRM-211ENST00000580170 TRGV11A0A075B6L2 103 aa17.55■□□□□ 0.4
PTPRM-211ENST00000580170 CD5LO43866 347 aa17.55■□□□□ 0.4
PTPRM-211ENST00000580170 CD33P20138 364 aa17.55■□□□□ 0.4
PTPRM-211ENST00000580170 LAGE3Q14657 143 aa17.55■□□□□ 0.4
PTPRM-211ENST00000580170 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
PTPRM-211ENST00000580170 RPL15P61313 204 aaKnown RBP17.54■□□□□ 0.4
PTPRM-211ENST00000580170 RSPO3Q9BXY4 272 aaPredicted RBP17.54■□□□□ 0.4
PTPRM-211ENST00000580170 IGHV3-64A0A075B6Q5 118 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 PLSCR4Q9NRQ2 329 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 LINC00527Q9UJ94 153 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 METRNQ9UJH8 293 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 C1orf122Q6ZSJ8 110 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 MDC1Q14676 2089 aaKnown RBP17.54■□□□□ 0.4
PTPRM-211ENST00000580170 D6R8Y8 96 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 NCR2O95944 276 aa17.54■□□□□ 0.4
PTPRM-211ENST00000580170 FAM166AQ6J272 317 aa17.53■□□□□ 0.4
PTPRM-211ENST00000580170 TMEM14EPQ6UXP3 125 aa17.53■□□□□ 0.4
PTPRM-211ENST00000580170 SLC25A48Q6ZT89 311 aaKnown RBP17.53■□□□□ 0.4
PTPRM-211ENST00000580170 TPRP12270 2363 aaKnown RBP17.53■□□□□ 0.4
PTPRM-211ENST00000580170 CITED2Q99967 270 aaPredicted RBP17.53■□□□□ 0.4
PTPRM-211ENST00000580170 CST9LQ9H4G1 147 aa17.53■□□□□ 0.4
PTPRM-211ENST00000580170 IGHV1-8P0DP01 117 aa17.53■□□□□ 0.4
PTPRM-211ENST00000580170 WNT2P09544 360 aa17.52■□□□□ 0.4
PTPRM-211ENST00000580170 QRFPP83859 136 aa17.52■□□□□ 0.4
PTPRM-211ENST00000580170 LINC01559Q495D7 138 aa17.52■□□□□ 0.4
PTPRM-211ENST00000580170 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.52■□□□□ 0.4
PTPRM-211ENST00000580170 TRAV41A0A0B4J266 112 aa17.52■□□□□ 0.39
PTPRM-211ENST00000580170 VMO1Q7Z5L0 202 aa17.52■□□□□ 0.39
PTPRM-211ENST00000580170 GBF1Q92538 1859 aa17.52■□□□□ 0.39
PTPRM-211ENST00000580170 IGHV1-3A0A0C4DH29 117 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 C2orf82Q6UX34 121 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 TRAV40A0A0B4J280 105 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 RASL11AQ6T310 242 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 LYZL1Q6UWQ5 148 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 E9PLN8 166 aa17.51■□□□□ 0.39
PTPRM-211ENST00000580170 ZNF581Q9P0T4 197 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 TMEM238C9JI98 176 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 IL18BPO95998 194 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 TCRAP04437 139 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 C15orf32Q32M92 178 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 LILRA1O75019 489 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 ZNF672Q499Z4 452 aaPredicted RBP17.5■□□□□ 0.39
PTPRM-211ENST00000580170 TRGV9Q99603 122 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 TRGV4A0A0C4DH28 118 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 SYS1-DBNDD2H3BUS1 97 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 ADCYAP1P18509 176 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 Q0VFX4 171 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 KLRD1Q13241 179 aa17.5■□□□□ 0.39
PTPRM-211ENST00000580170 PSG3Q16557 428 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 KLF17Q5JT82 389 aaPredicted RBP17.49■□□□□ 0.39
PTPRM-211ENST00000580170 SVILO95425 2214 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 A0A1B0GWJ7 208 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 LGALS1P09382 135 aaKnown RBP17.49■□□□□ 0.39
PTPRM-211ENST00000580170 LINC00473A8K010 186 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 POLR3KQ9Y2Y1 108 aaPredicted RBP17.49■□□□□ 0.39
PTPRM-211ENST00000580170 TET1Q8NFU7 2136 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 NTF4P34130 210 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 Q6P435 159 aa17.49■□□□□ 0.39
PTPRM-211ENST00000580170 TMEM178BH3BS89 294 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 FXYD7P58549 80 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 NUP35Q8NFH5 326 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 ZNF48Q96MX3 618 aaPredicted RBP17.48■□□□□ 0.39
PTPRM-211ENST00000580170 SNHG12Q9BXW3 62 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 A0A0U1RRA0 63 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 H0YJW9 148 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 CD59P13987 128 aa17.48■□□□□ 0.39
PTPRM-211ENST00000580170 LSM4Q9Y4Z0 139 aaKnown RBP17.48■□□□□ 0.39
PTPRM-211ENST00000580170 PHLDA1Q8WV24 401 aaPredicted RBP17.48■□□□□ 0.39
PTPRM-211ENST00000580170 MRPL27Q9P0M9 148 aaKnown RBP17.48■□□□□ 0.39
PTPRM-211ENST00000580170 TRBV6-6A0A0A6YYG2 114 aa17.47■□□□□ 0.39
PTPRM-211ENST00000580170 NCOR1P1Q9H4R4 102 aa17.47■□□□□ 0.39
PTPRM-211ENST00000580170 ADARB2-AS1A8MUL3 147 aa17.47■□□□□ 0.39
PTPRM-211ENST00000580170 SH2D1AO60880 128 aa17.47■□□□□ 0.39
PTPRM-211ENST00000580170 SPANXA1Q9NS26 97 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 TMEM8BA6NDV4 472 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 TMEM219Q86XT9 240 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 RPRMLQ8N4K4 120 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 TMEM190Q8WZ59 177 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 LYL1P12980 280 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 FAM90A2PQ658T7 463 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 BMPERQ8N8U9 685 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 GAFA1Q96PS6 74 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 NPSP0C0P6 89 aa17.46■□□□□ 0.39
PTPRM-211ENST00000580170 WDR90Q96KV7 1748 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 C17orf82Q86X59 251 aaPredicted RBP17.45■□□□□ 0.38
PTPRM-211ENST00000580170 DEFB104AQ8WTQ1 72 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 LY96Q9Y6Y9 160 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 C9orf153Q5TBE3 101 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 C20orf144Q9BQM9 153 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 CSRP1P21291 193 aaKnown RBP17.45■□□□□ 0.38
PTPRM-211ENST00000580170 LINC00205P59089 165 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 NPC2P61916 151 aa17.45■□□□□ 0.38
PTPRM-211ENST00000580170 XIRP1Q702N8 1843 aaKnown RBP17.45■□□□□ 0.38
PTPRM-211ENST00000580170 SPACA3Q8IXA5 215 aa17.44■□□□□ 0.38
PTPRM-211ENST00000580170 IGHV3-73A0A0B4J1V6 119 aa17.44■□□□□ 0.38
PTPRM-211ENST00000580170 IGHV2-70P01814 119 aa17.44■□□□□ 0.38
PTPRM-211ENST00000580170 A0A0G2JRQ6 117 aa17.43■□□□□ 0.38
PTPRM-211ENST00000580170 C3orf36Q3SXR2 165 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms