RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 LTBP3Q9NS15 1303 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 CCL3P10147 92 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 CSRP1P21291 193 aaKnown RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 TMEM196Q5HYL7 178 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 RNF125Q96EQ8 232 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 FAM236DA0A1B0GTK5 79 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 FAM236CP0DP71 79 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 FHL1Q13642 323 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 ECSCRQ19T08 205 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 RSPO4Q2I0M5 234 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 ZNF474Q6S9Z5 364 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 HRCT1Q6UXD1 115 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 GTSF1Q8WW33 167 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 VPREB3Q9UKI3 123 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 FAM240AA0A1B0GVK7 77 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 WNT9BO14905 357 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 LEPROTO15243 131 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 SEC61GP60059 68 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 NEU4Q8WWR8 484 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 C1orf147Q96MC9 270 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 IGKV1-27A0A075B6S5 117 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 TRAV41A0A0B4J266 112 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 SLC25A53Q5H9E4 307 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 LYPD1Q8N2G4 141 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 PHLDA1Q8WV24 401 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 CCL17Q92583 94 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 CHCHD2Q9Y6H1 151 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 NHSQ6T4R5 1651 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 TOPAZ1Q8N9V7 1692 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 SAA2P0DJI9 122 aaPredicted RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 NPPCP23582 126 aa3.6□□□□□ -1.83
CDH8-205ENST00000577730 REPIN1Q9BWE0 567 aaKnown RBP3.6□□□□□ -1.83
CDH8-205ENST00000577730 FOXF2Q12947 444 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 RASL10AQ92737 203 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 LAMB1P07942 1786 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 IGHV1OR21-1A0A087WYE8 117 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TRGV5A0A0B4J1U4 118 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TRAV25A0A0B4J276 109 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 RHODO00212 210 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TNRC6CQ9HCJ0 1690 aaKnown RBP3.59□□□□□ -1.83
CDH8-205ENST00000577730 IGKV3D-15A0A087WSY6 115 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 VCYO14598 125 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 RS1O15537 224 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 IGKV3-15P01624 115 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 Q6Q795 121 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 Q8N1Y9 231 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 RPUSD1Q9UJJ7 312 aaKnown RBP3.59□□□□□ -1.83
CDH8-205ENST00000577730 J3QQQ9 107 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 K7EMI3 77 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 CRYGBP07316 175 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TMEM75Q8N9X5 138 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 LY6G5BQ8NDX9 201 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 C10orf105Q8TEF2 133 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
CDH8-205ENST00000577730 NHSL1Q5SYE7 1610 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 IGKV3-7A0A075B6H7 116 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 hADV29S1A0JD25 119 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 CECR9P0C854 216 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 RNASE2P10153 161 aaKnown RBP3.59□□□□□ -1.84
CDH8-205ENST00000577730 FGFBP3Q8TAT2 258 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 KIF13BQ9NQT8 1826 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 DAD1P61803 113 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 TRGV9Q99603 122 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 DCTN5Q9BTE1 182 aa3.59□□□□□ -1.84
CDH8-205ENST00000577730 NDUFC2-KCTD14E9PQ53 114 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV1-39P01597 117 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV1D-39P04432 117 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 FOXG1P55316 489 aaPredicted RBP3.58□□□□□ -1.84
CDH8-205ENST00000577730 HAMPP81172 84 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IL11RAQ14626 422 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 FAM168AQ92567 244 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 TP73-AS1Q9UF72 201 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 KIAA1551Q9HCM1 1747 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 LTAP01374 205 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 ZNF493Q6ZR52 646 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV3D-11A0A0A0MRZ8 115 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV3-11P04433 115 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 MAGEA5P43359 124 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 C3orf36Q3SXR2 165 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 PIFOQ8TCI5 191 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 RNF166Q96A37 237 aaPredicted RBP3.58□□□□□ -1.84
CDH8-205ENST00000577730 C21orf62Q9NYP8 219 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 TMEM86BQ8N661 226 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 SRXN1Q9BYN0 137 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 TP53TG3Q9ULZ0 132 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 TRGV11A0A075B6L2 103 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV2-40A0A087WW87 121 aaPredicted RBP3.58□□□□□ -1.84
CDH8-205ENST00000577730 TRAV3A0A0B4J244 114 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV3D-20A0A0C4DH25 116 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 LMO7DNF2Z398 122 aa3.58□□□□□ -1.84
CDH8-205ENST00000577730 IGKV2D-40P01614 121 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 264.7 ms