RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ARL6IP6Q8N6S5 226 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 NOTCH3Q9UM47 2321 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 MALRD1Q5VYJ5 2156 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 F2RL2O00254 374 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 IGHV1-46P01743 117 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 TCRAP04437 139 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 PRR20EP86478 221 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 PRR20CP86479 221 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 PRR20DP86480 221 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 PRR20BP86481 221 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 PRR20AP86496 221 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 MDS2Q8NDY4 140 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 OR2K2Q8NGT1 345 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 TMEM160Q9NX00 188 aa8.57□□□□□ -1.04
USB1-212ENST00000566082 DMDP11532 3685 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 IGKV3-15P01624 115 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 IGHV3-23P01764 117 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 BMI1P35226 326 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 GUSBP1Q15486 140 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
USB1-212ENST00000566082 HIST1H4GQ99525 98 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 PRRC2CQ9Y520 2896 aaKnown RBP8.56□□□□□ -1.04
USB1-212ENST00000566082 CD3EP07766 207 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 TMEM249Q2WGJ8 235 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 OTORQ9NRC9 128 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 PSG8Q9UQ74 426 aa8.56□□□□□ -1.04
USB1-212ENST00000566082 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
USB1-212ENST00000566082 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 CEACAM8P31997 349 aaPredicted RBP8.55□□□□□ -1.04
USB1-212ENST00000566082 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 EBLN2Q6P2I7 272 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 PCNX2A6NKB5 2137 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 F5H697 171 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 CIDEAO60543 219 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 MMP23AO75900 390 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 C11orf53Q8IXP5 236 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 FRYLO94915 3013 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 RPL7P18124 248 aaKnown RBP8.55□□□□□ -1.04
USB1-212ENST00000566082 MEF2CQ06413 473 aaPredicted RBP8.55□□□□□ -1.04
USB1-212ENST00000566082 Q1RN00 199 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 ZNF502Q8TBZ5 544 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 MS4A6AQ9H2W1 248 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
USB1-212ENST00000566082 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
USB1-212ENST00000566082 NCR2O95944 276 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 MGPP08493 103 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 OCIAD2Q56VL3 154 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 NHP2Q9NX24 153 aaKnown RBP8.54□□□□□ -1.04
USB1-212ENST00000566082 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PPIAL4CA0A0B4J2A2 164 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 C17orf100A8MU93 164 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 D6R8Y8 96 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PPIAL4GP0DN37 164 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PPIFP30405 207 aaKnown RBP8.54□□□□□ -1.04
USB1-212ENST00000566082 MFAP4P55083 255 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PSG9Q00887 426 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PPP1R27Q86WC6 154 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 FOXC2Q99958 501 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 FNDC10F2Z333 226 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 H0YJW9 148 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 SEC11AP67812 179 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
USB1-212ENST00000566082 C8orf46Q8TAG6 207 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 CHD9Q3L8U1 2897 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 M0R3E3 92 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 HBDP02042 147 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 TMPRSS3P57727 454 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 BRWD1-AS2P59051 145 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 DAZAP2Q15038 168 aaPredicted RBP8.54□□□□□ -1.04
USB1-212ENST00000566082 Q8TCH9 128 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 SLC25A15Q9Y619 301 aa8.54□□□□□ -1.04
USB1-212ENST00000566082 PLXNB1O43157 2135 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 H3BVH4 76 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 FTH1P19P0C7X4 201 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 SRSF6Q13247 344 aaKnown RBP8.53□□□□□ -1.04
USB1-212ENST00000566082 C17orf58Q2M2W7 97 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 MORN5Q5VZ52 161 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 TMEM167AQ8TBQ9 72 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 COL8A2P25067 703 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 LOXL3P58215 753 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 FER1L6-AS1Q8NA97 138 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 PLSCR4Q9NRQ2 329 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 IGHV3-66A0A0C4DH42 116 aa8.53□□□□□ -1.04
USB1-212ENST00000566082 A0A0G2JLM5 398 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms