RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 UFC1Q9Y3C8 167 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 RFNGQ9Y644 331 aa9.87□□□□□ -0.83
CLK3-214ENST00000564096 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 MAP1LC3B2A6NCE7 125 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 HOXD3P31249 432 aaPredicted RBP9.86□□□□□ -0.83
CLK3-214ENST00000564096 USF2Q15853 346 aaPredicted RBP9.86□□□□□ -0.83
CLK3-214ENST00000564096 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 C8orf86Q6ZUL3 223 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 REC114Q7Z4M0 266 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 PRIMA1Q86XR5 153 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 GPHB5Q86YW7 130 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 OR11H1Q8NG94 326 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 OR1N2Q8NGR9 330 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
CLK3-214ENST00000564096 DAZ1Q9NQZ3 744 aaKnown RBP9.86□□□□□ -0.83
CLK3-214ENST00000564096 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
CLK3-214ENST00000564096 ZNF320A2RRD8 509 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 DEFB136Q30KP8 78 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
CLK3-214ENST00000564096 TMEM37Q8WXS4 190 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 GRAMD2BQ96HH9 432 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 TMEM231Q9H6L2 316 aa9.85□□□□□ -0.83
CLK3-214ENST00000564096 SETD2Q9BYW2 2564 aaPredicted RBP9.85□□□□□ -0.83
CLK3-214ENST00000564096 A8MWP6 167 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 H3BRN7 92 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 M0QZ24 198 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 LGALS9O00182 355 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 C8orf88P0DMB2 117 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 NPPCP23582 126 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 FHITP49789 147 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 NSUN5P1Q3KNT7 163 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 CLLU1Q5K131 121 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 PQLC2Q6ZP29 291 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 C18orf65Q6ZTR6 163 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 RAB24Q969Q5 203 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 SHANK2-AS3Q9BTD1 123 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.83
CLK3-214ENST00000564096 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
CLK3-214ENST00000564096 MRPL27Q9P0M9 148 aaKnown RBP9.84□□□□□ -0.83
CLK3-214ENST00000564096 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 CUBNO60494 3623 aa9.84□□□□□ -0.83
CLK3-214ENST00000564096 A0A1W2PS18 150 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 CCL24O00175 119 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 OR7C2O60412 319 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 CXorf1O96002 111 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 NMBP08949 121 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 SYNJ2BPP57105 145 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 FHL3Q13643 280 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 LCN15Q6UWW0 184 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 UNQ9165/PRO28630Q6UXU0 137 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 OR4F17Q8NGA8 305 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 GPR82Q96P67 336 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 OR4F4Q96R69 305 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 CITED1Q99966 193 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 PLA2G2EQ9NZK7 142 aa9.83□□□□□ -0.84
CLK3-214ENST00000564096 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 TRAV1-1A0A0B4J248 108 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 K7EMT4 169 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 IFNA1P01562 189 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 PF4P02776 101 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 STAG3L2P0CL84 134 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 STAG3L3P0CL85 134 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 RPL7P18124 248 aaKnown RBP9.82□□□□□ -0.84
CLK3-214ENST00000564096 CRYBB3P26998 211 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 MYCNOSP40205 109 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 PPT1P50897 306 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 SLURP1P55000 103 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 UBE2L3P68036 154 aaKnown RBP9.82□□□□□ -0.84
CLK3-214ENST00000564096 C1orf194Q5T5A4 169 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 PATE2Q6UY27 113 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 MIR17HGQ75NE6 70 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 BPIFA4PQ86YQ2 179 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 MBD3L1Q8WWY6 194 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 MARC2Q969Z3 335 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 ELOVL1Q9BW60 279 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 SCRT1Q9BWW7 348 aa9.82□□□□□ -0.84
CLK3-214ENST00000564096 ZNF98A6NK75 572 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 KRTAP10-3P60369 221 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
CLK3-214ENST00000564096 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 ZNF414Q96IQ9 312 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 SLC25A2Q9BXI2 301 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 HRH4Q9H3N8 390 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
CLK3-214ENST00000564096 IGHV7-4-1A0A0J9YVY3 117 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 A0A1B0GV50 99 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 HMGB3O15347 200 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms