RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 STAG3L3P0CL85 134 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 CD28P10747 220 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 CCL20P78556 96 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 LINC00305Q7Z4B0 112 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 MRPL32Q9BYC8 188 aaKnown RBP7.82□□□□□ -1.16
SMG1-208ENST00000563448 MAP1LC3BQ9GZQ8 125 aa7.82□□□□□ -1.16
SMG1-208ENST00000563448 IGHV3OR16-8A0A075B7F1 116 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 TRAV1-1A0A0B4J248 108 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 TRAV5A0A0B4J249 113 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 I3L521 148 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 CDX1P47902 265 aaPredicted RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 FAM209BQ5JX69 171 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 RNF2Q99496 336 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 HIGD1AQ9Y241 93 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 GGCTO75223 188 aaKnown RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 HBE1P02100 147 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 C11orf44Q8N8P7 122 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 SLC25A2Q9BXI2 301 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 SLC25A39Q9BZJ4 359 aaPredicted RBP7.81□□□□□ -1.16
SMG1-208ENST00000563448 TMPRSS5Q9H3S3 457 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 MED9Q9NWA0 146 aa7.81□□□□□ -1.16
SMG1-208ENST00000563448 C2CD3Q4AC94 2353 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 IGHV4OR15-8A0A075B7B6 117 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 A0A087WW49 117 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 H3BRN7 92 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 NDUFA4O00483 81 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 KRTAP10-3P60369 221 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 TECRQ9NZ01 308 aaKnown RBP7.8□□□□□ -1.16
SMG1-208ENST00000563448 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
SMG1-208ENST00000563448 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
SMG1-208ENST00000563448 ARL14EPLP0DKL9 152 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 C8orf88P0DMB2 117 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 KHDC1LQ5JSQ8 128 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 UNQ9165/PRO28630Q6UXU0 137 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 COMMD7Q86VX2 200 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 C4orf3Q8WVX3 66 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
SMG1-208ENST00000563448 SCRT1Q9BWW7 348 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 CXorf1O96002 111 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 HSPB1P04792 205 aaKnown RBP7.79□□□□□ -1.16
SMG1-208ENST00000563448 DEFB136Q30KP8 78 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 LEMD1Q68G75 181 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 IL34Q6ZMJ4 242 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 MARC2Q969Z3 335 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 SHANK2-AS3Q9BTD1 123 aa7.79□□□□□ -1.16
SMG1-208ENST00000563448 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
SMG1-208ENST00000563448 TAS2R45P59539 299 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 CTAG1AP78358 180 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 KHDC3LQ587J8 217 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 GPHB5Q86YW7 130 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 C20orf24Q9BUV8 137 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 A0A1B0GUS0 222 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 ZNF98A6NK75 572 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 NUDT19A8MXV4 375 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 APOHP02749 345 aaPredicted RBP7.78□□□□□ -1.16
SMG1-208ENST00000563448 PYYP10082 97 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 GCHFRP30047 84 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 SRSF3P84103 164 aaKnown RBP7.78□□□□□ -1.16
SMG1-208ENST00000563448 RPEL1Q2QD12 228 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 PQLC2Q6ZP29 291 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
SMG1-208ENST00000563448 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
SMG1-208ENST00000563448 A0A1W2PRX2 142 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 KRBOX1C9JBD0 128 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 OR7C2O60412 319 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 OR10J4P0C629 311 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 CRYBB3P26998 211 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 PRIMA1Q86XR5 153 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 OR11H1Q8NG94 326 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 DUX3Q96PT4 197 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 METTL26Q96S19 204 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 PAXXQ9BUH6 204 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 U3KQE9 123 aa7.77□□□□□ -1.17
SMG1-208ENST00000563448 ZNF320A2RRD8 509 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 RAB19A4D1S5 217 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 LINC01619G3V211 115 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 BUB3O43684 328 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 GP9P14770 177 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 ZP3P21754 424 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 HOXD3P31249 432 aaPredicted RBP7.76□□□□□ -1.17
SMG1-208ENST00000563448 PSMB3P49720 205 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 SLURP1P55000 103 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 FOXL1Q12952 345 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 PMS2P11Q13670 270 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 GUK1Q16774 197 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 HAGHQ16775 308 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 FAM106AQ4KMX7 169 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 OR1N2Q8NGR9 330 aa7.76□□□□□ -1.17
SMG1-208ENST00000563448 FXYD5Q96DB9 178 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms