RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 DOK5Q9P104 306 aa17.27■□□□□ 0.35
SYNGR3-202ENST00000562045 LINC00862A6NCI5 91 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 OR2C1O95371 312 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 HBE1P02100 147 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 OR5G3P0C626 314 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 ORM2P19652 201 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 LYZP61626 148 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 FAM78BQ5VT40 261 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 C10orf113Q5VZT2 155 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 ZNF600Q6ZNG1 722 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 OR1B1Q8NGR6 318 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 TMEM37Q8WXS4 190 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 PFDN2Q9UHV9 154 aa17.26■□□□□ 0.35
SYNGR3-202ENST00000562045 TRAV1-1A0A0B4J248 108 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 MAP1LC3B2A6NCE7 125 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 ARL3P36405 182 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 RELQ04864 619 aaPredicted RBP17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 LCN15Q6UWW0 184 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 SSX7Q7RTT5 188 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 RNF125Q96EQ8 232 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 RAX2Q96IS3 184 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 MRPL32Q9BYC8 188 aaKnown RBP17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 MAP1LC3BQ9GZQ8 125 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 MED9Q9NWA0 146 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 FUT9Q9Y231 359 aa17.25■□□□□ 0.35
SYNGR3-202ENST00000562045 HYPMO75409 117 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 IL4P05112 153 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 PBDC1Q9BVG4 233 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 I3L521 148 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 PATE2Q6UY27 113 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 C4orf3Q8WVX3 66 aa17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 PUS1Q9Y606 427 aaKnown RBP eCLIP17.24■□□□□ 0.35
SYNGR3-202ENST00000562045 WI2-2373I1.2A0A1W2PRP0 233 aa17.23■□□□□ 0.35
SYNGR3-202ENST00000562045 PPP5D1E7EU14 171 aa17.23■□□□□ 0.35
SYNGR3-202ENST00000562045 OR4F17Q8NGA8 305 aa17.23■□□□□ 0.35
SYNGR3-202ENST00000562045 OR4F4Q96R69 305 aa17.23■□□□□ 0.35
SYNGR3-202ENST00000562045 PEF1Q9UBV8 284 aaKnown RBP17.23■□□□□ 0.35
SYNGR3-202ENST00000562045 ANKRD34BA5PLL1 514 aa17.22■□□□□ 0.35
SYNGR3-202ENST00000562045 HMGB3O15347 200 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-202ENST00000562045 HIGD1AQ9Y241 93 aa17.22■□□□□ 0.35
SYNGR3-202ENST00000562045 A0A1B0GV50 99 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 TRBV12-3P01733 135 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 STAG3L2P0CL84 134 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 STAG3L3P0CL85 134 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 TAS2R45P59539 299 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 SPATA31B1PQ5VZV4 182 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 IL34Q6ZMJ4 242 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 LINC00305Q7Z4B0 112 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 S100A7AQ86SG5 101 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 UHRF2Q96PU4 802 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 MRPL27Q9P0M9 148 aaKnown RBP17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 MGAM2Q2M2H8 2515 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 IGHV3-35A0A0C4DH35 117 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 EIF3GO75821 320 aaKnown RBP eCLIP17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 LGALS1P09382 135 aaKnown RBP17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 MIR17HGQ75NE6 70 aa17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 TECRQ9NZ01 308 aaKnown RBP17.21■□□□□ 0.35
SYNGR3-202ENST00000562045 BMPR1BO00238 502 aa17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 FGF8P55075 233 aaPredicted RBP17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 COMMD7Q86VX2 200 aa17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 OR11H1Q8NG94 326 aa17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 MARC2Q969Z3 335 aa17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 NBEAL1Q6ZS30 2694 aa17.2■□□□□ 0.34
SYNGR3-202ENST00000562045 CCL24O00175 119 aa17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 GGCTO75223 188 aaKnown RBP17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 C8orf88P0DMB2 117 aa17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 USF2Q15853 346 aaPredicted RBP17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 TOMM20LQ6UXN7 152 aa17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 ZNF414Q96IQ9 312 aa17.19■□□□□ 0.34
SYNGR3-202ENST00000562045 CXorf1O96002 111 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 SLC7A5P1Q8MH63 180 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 SLC25A39Q9BZJ4 359 aaPredicted RBP17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 ZFAND3Q9H8U3 227 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 IGHV4OR15-8A0A075B7B6 117 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 A0A087WW49 117 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 NDUFA4O00483 81 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 PF4P02776 101 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 S100A7P31151 101 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 FHL3Q13643 280 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 PQLC2Q6ZP29 291 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 LINC00482Q8N8I6 264 aa17.18■□□□□ 0.34
SYNGR3-202ENST00000562045 ARL14EPLP0DKL9 152 aa17.17■□□□□ 0.34
SYNGR3-202ENST00000562045 CCL20P78556 96 aa17.17■□□□□ 0.34
SYNGR3-202ENST00000562045 MORN5Q5VZ52 161 aa17.17■□□□□ 0.34
SYNGR3-202ENST00000562045 RAB19A4D1S5 217 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 MYCNOSP40205 109 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 IQCF2Q8IXL9 164 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 OR1N2Q8NGR9 330 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 RABAC1Q9UI14 185 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 H3BRN7 92 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 OR7C2O60412 319 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 PSMB3P49720 205 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 STXBP6Q8NFX7 210 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 SHANK2-AS3Q9BTD1 123 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 SLC25A2Q9BXI2 301 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 RNF24Q9Y225 148 aa17.16■□□□□ 0.34
SYNGR3-202ENST00000562045 FAM167A-AS1Q96KT0 104 aa17.15■□□□□ 0.34
SYNGR3-202ENST00000562045 TRAV5A0A0B4J249 113 aa17.14■□□□□ 0.33
SYNGR3-202ENST00000562045 PPT1P50897 306 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms