RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IL4P05112 153 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 CTSGP08311 255 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
TPM1-215ENST00000558868 ZNF600Q6ZNG1 722 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 ZNF491Q8N8L2 437 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 SLC25A39Q9BZJ4 359 aaPredicted RBP10.75□□□□□ -0.69
TPM1-215ENST00000558868 NPFFR1Q9GZQ6 430 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 TMEM14CQ9P0S9 112 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 YTHDF2Q9Y5A9 579 aaKnown RBP10.75□□□□□ -0.69
TPM1-215ENST00000558868 S4R3C0 116 aa10.75□□□□□ -0.69
TPM1-215ENST00000558868 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 B4DEV8 164 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
TPM1-215ENST00000558868 CLEC3BP05452 202 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 OR10J4P0C629 311 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 ATP5G3P48201 142 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
TPM1-215ENST00000558868 BTN1A1Q13410 526 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 TMEM241Q24JQ0 296 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 AWAT1Q58HT5 328 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 FAM209BQ5JX69 171 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 TCEAL7Q9BRU2 100 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 NAT8Q9UHE5 227 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 ABCA1O95477 2261 aa10.74□□□□□ -0.69
TPM1-215ENST00000558868 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
TPM1-215ENST00000558868 H3BRN7 92 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 BMPR1BO00238 502 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 TGOLN2O43493 480 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 GPR183P32249 361 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 TPPP2P59282 170 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 ZNF674Q2M3X9 581 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 SIGLECL1Q8N7X8 197 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 C11orf52Q96A22 123 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
TPM1-215ENST00000558868 FXYD5Q96DB9 178 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 PARLQ9H300 379 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 YAE1D1Q9NRH1 226 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 PRELID1Q9Y255 219 aa10.73□□□□□ -0.69
TPM1-215ENST00000558868 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 IGLV1-40P01703 118 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 PF4V1P10720 104 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 CLEC19AQ6UXS0 136 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 NOL4LQ96MY1 436 aaPredicted RBP10.72□□□□□ -0.69
TPM1-215ENST00000558868 CHRDL1Q9BU40 450 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 SMCO4Q9NRQ5 59 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
TPM1-215ENST00000558868 A0A087WWC5 75 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
TPM1-215ENST00000558868 NBEAP1P0C6P0 100 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 PYYP10082 97 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
TPM1-215ENST00000558868 GP9P14770 177 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 ADMP35318 185 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 RAB9AP51151 201 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 SLC35B1P78383 322 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 CFHR3Q02985 330 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 KIAA0141Q14154 515 aaPredicted RBP10.71□□□□□ -0.69
TPM1-215ENST00000558868 OR4F17Q8NGA8 305 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 CCDC140Q96MF4 163 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 TMEM160Q9NX00 188 aa10.71□□□□□ -0.69
TPM1-215ENST00000558868 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 ZNF98A6NK75 572 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 NDUFB4O95168 129 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 IGHG4P01861 327 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 SUMO1P63165 101 aaKnown RBP10.7□□□□□ -0.7
TPM1-215ENST00000558868 KRTAP1-1Q07627 177 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 USF2Q15853 346 aaPredicted RBP10.7□□□□□ -0.7
TPM1-215ENST00000558868 Q6ZS46 218 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 C20orf24Q9BUV8 137 aa10.7□□□□□ -0.7
TPM1-215ENST00000558868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
TPM1-215ENST00000558868 SCO2A0A1W2PP80 73 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 NPPCP23582 126 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 ARL3P36405 182 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 ZNF343Q6P1L6 599 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 TOMM20LQ6UXN7 152 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
TPM1-215ENST00000558868 GGTLC3B5MD39 225 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
TPM1-215ENST00000558868 ADIRFQ15847 76 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 LEMD1Q68G75 181 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 Q8N2B8 174 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 LYPD1Q8N2G4 141 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 BLNKQ8WV28 456 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 GPR82Q96P67 336 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 CTDSP1Q9GZU7 261 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
TPM1-215ENST00000558868 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms