RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
TPM1-212ENST00000558347 A0A1W2PPQ1 181 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 C9JCJ5 164 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 NDUFB4O95168 129 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 GCGP01275 180 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 GCHFRP30047 84 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 ATP5G3P48201 142 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRR20EP86478 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRR20CP86479 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRR20DP86480 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRR20BP86481 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRR20AP86496 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PRCDQ00LT1 54 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 JOSD1Q15040 202 aaPredicted RBP8.08□□□□□ -1.12
TPM1-212ENST00000558347 GCSAMLQ5JQS6 135 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 FAM209BQ5JX69 171 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 MOB3BQ86TA1 216 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 NECAP1Q8NC96 275 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 ELOVL1Q9BW60 279 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 BET1LQ9NYM9 111 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 OR51B2Q9Y5P1 312 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
TPM1-212ENST00000558347 INS-IGF2F8WCM5 200 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 G3V4G9 280 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 UPK2O00526 184 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 CA2P00918 260 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 IGLV2-23P01705 113 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 AMBPP02760 352 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 EBI3Q14213 229 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 TCTEX1D4Q5JR98 221 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 C10orf99Q6UWK7 81 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 STPG3Q8N7X2 389 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 OR5AU1Q8NGC0 362 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 OR4A5Q8NH83 315 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 VSTM2AQ8TAG5 236 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 SFRP2Q96HF1 295 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 HARBI1Q96MB7 349 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 PLEKHA3Q9HB20 300 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
TPM1-212ENST00000558347 ZMAT5Q9UDW3 170 aaKnown RBP8.08□□□□□ -1.12
TPM1-212ENST00000558347 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 IGHV3-72A0A0B4J1Y9 119 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 FAM106CPP0CH98 169 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 SAA1P0DJI8 122 aaPredicted RBP8.07□□□□□ -1.12
TPM1-212ENST00000558347 CHRNA7P36544 502 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 UBE2G2P60604 165 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 HES1Q14469 280 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 C2orf83Q53S99 150 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 PDZD11Q5EBL8 140 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 C9orf152Q5JTZ5 239 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 TEX45Q8NA69 505 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 OR5B3Q8NH48 314 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 TMEM167AQ8TBQ9 72 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 SLC45A2Q9UMX9 530 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 MOB4Q9Y3A3 225 aa8.07□□□□□ -1.12
TPM1-212ENST00000558347 MOSP00540 346 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 CRYGBP07316 175 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 TMEM11P17152 192 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 CNN1P51911 297 aaKnown RBP8.06□□□□□ -1.12
TPM1-212ENST00000558347 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
TPM1-212ENST00000558347 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 FAM78BQ5VT40 261 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 Q8N6K4 173 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 OR10G8Q8NGN5 311 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 RNF2Q99496 336 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 FUT9Q9Y231 359 aa8.06□□□□□ -1.12
TPM1-212ENST00000558347 YTHDF2Q9Y5A9 579 aaKnown RBP8.06□□□□□ -1.12
TPM1-212ENST00000558347 SCO2A0A1W2PP80 73 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 A0A1W2PRX2 142 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 ZNF320A2RRD8 509 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 M0QZK8 103 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 LINC00869P0C866 280 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 DEFA4P12838 97 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 GAMTQ14353 236 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 PSG5Q15238 335 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 BEAN1Q3B7T3 259 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 C5orf56Q8N8D9 126 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 NPBQ8NG41 125 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 CACNG8Q8WXS5 425 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 EAF1Q96JC9 268 aaPredicted RBP8.05□□□□□ -1.12
TPM1-212ENST00000558347 RITA1Q96K30 269 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 NOL4LQ96MY1 436 aaPredicted RBP8.05□□□□□ -1.12
TPM1-212ENST00000558347 TECRQ9NZ01 308 aaKnown RBP8.05□□□□□ -1.12
TPM1-212ENST00000558347 IL36BQ9NZH7 164 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
TPM1-212ENST00000558347 TRBV9A0A0B4J1U6 114 aa8.04□□□□□ -1.12
TPM1-212ENST00000558347 NDUFA3O95167 84 aa8.04□□□□□ -1.12
TPM1-212ENST00000558347 OR5G3P0C626 314 aa8.04□□□□□ -1.12
TPM1-212ENST00000558347 OR10J4P0C629 311 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms