RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR4B1Q8NGF8 309 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 TRGV9Q99603 122 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
SNRPA1-204ENST00000558020 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 PITX3O75364 302 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 AMBPP02760 352 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 S100A5P33763 92 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 GALR1P47211 349 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 OR2F1Q13607 317 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 LRTM2Q8N967 370 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 WDR12Q9GZL7 423 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 RPRMQ9NS64 109 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 RFNGQ9Y644 331 aa9.79□□□□□ -0.84
SNRPA1-204ENST00000558020 IGKV1D-37A0A075B6S9 117 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF705FA8MVS1 300 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 H3BMQ9 156 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF705DP0CH99 300 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF705BP0CI00 300 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 EMP1P54849 157 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 PSG9Q00887 426 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 ZNF767PQ75MW2 155 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 FAM210BQ96KR6 192 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 SLC45A2Q9UMX9 530 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 CELA1Q9UNI1 258 aa9.78□□□□□ -0.84
SNRPA1-204ENST00000558020 SYNGR2O43760 224 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 IFNA21P01568 189 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 IAPPP10997 89 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 BPIFCQ8NFQ6 507 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 C16orf92Q96LL3 132 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 GPR82Q96P67 336 aa9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 C7orf50Q9BRJ6 194 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-204ENST00000558020 WRBO00258 174 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 HBE1P02100 147 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 PAX9P55771 341 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 FXYD7P58549 80 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 ZNF79Q15937 498 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 FAM78BQ5VT40 261 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 S100A7AQ86SG5 101 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 OR1B1Q8NGR6 318 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 RSG1Q9BU20 258 aa9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 STRAPQ9Y3F4 350 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-204ENST00000558020 SOCS3O14543 225 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 SFT2D2O95562 160 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 ORM2P19652 201 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 UBE2MP61081 183 aaKnown RBP9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 SPANXN5Q5MJ07 72 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 NIPSNAP3BQ9BS92 247 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 TMEM147Q9BVK8 224 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 SLC25A22Q9H936 323 aa9.75□□□□□ -0.85
SNRPA1-204ENST00000558020 IGKV1OR2-108A0A075B7D4 117 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 A0A0J9YX75 114 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 CCDC160A6NGH7 325 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 ZNF98A6NK75 572 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 DUSP14O95147 198 aaKnown RBP9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 HOXB5P09067 269 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 INPP1P49441 399 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 DEFB1P60022 68 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 PPP1R1AQ13522 171 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 OXA1LQ15070 435 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 RRN3P1Q2M238 152 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 DOK5Q9P104 306 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 DKK2Q9UBU2 259 aa9.74□□□□□ -0.85
SNRPA1-204ENST00000558020 SPANXN2Q5MJ10 180 aa9.73□□□□□ -0.85
SNRPA1-204ENST00000558020 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
SNRPA1-204ENST00000558020 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
SNRPA1-204ENST00000558020 RNF24Q9Y225 148 aa9.73□□□□□ -0.85
SNRPA1-204ENST00000558020 VPS13DQ5THJ4 4388 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 F6UB75 175 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 IL5P05113 134 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 RAP2BP61225 183 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 B2MP61769 119 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 TMEM144Q7Z5S9 345 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 IGF2BP2-AS1Q96M15 143 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 SLC25A32Q9H2D1 315 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 V9GYH0 126 aa9.72□□□□□ -0.85
SNRPA1-204ENST00000558020 SMCO3A2RU48 225 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 NAP1L6A6NFF2 107 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 PRSS46E5RG02 174 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 HYPMO75409 117 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 HTN3P15516 51 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 DAD1P61803 113 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 SELENOTP62341 195 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 ID3Q02535 119 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 RNF212Q495C1 297 aa9.71□□□□□ -0.86
SNRPA1-204ENST00000558020 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms