RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SEPSECSQ9HD40 501 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 TMEM167BQ9NRX6 74 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TNFRSF19Q9NS68 423 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TMEM242Q9NWH2 141 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 THYN1Q9P016 225 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NAT8Q9UHE5 227 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 ARL2-SNX15V9GYD0 113 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 DOPEY2Q9Y3R5 2298 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 STAB1Q9NY15 2570 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SPTBN1Q01082 2364 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 NBASA2RRP1 2371 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 IGKV1OR2-108A0A075B7D4 117 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 TRAV30A0A087WSZ9 112 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 IGHV1-69DA0A0B4J2H0 117 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 CENPVL3A0A0U1RRI6 287 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 A0A1W2PRD5 423 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 A0A1W2PRF3 423 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 A0A1W2PRM7 423 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 FAM74A7A6NL05 159 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 COLCA2A8K830 154 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 NPIPB5A8MRT5 1133 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 I3L2K1 104 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 HMGB3O15347 200 aaKnown RBP3.5□□□□□ -1.85
SRP54-212ENST00000556992 COX7A2P2O60397 106 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 HYPMO75409 117 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 SCGB2A1O75556 95 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 OR2C1O95371 312 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 IGHV1-69P01742 117 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 REG1AP05451 166 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 RD3LP0DJH9 198 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 HIST1H1BP16401 226 aaKnown RBP3.5□□□□□ -1.85
SRP54-212ENST00000556992 GCHFRP30047 84 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 SAA4P35542 130 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 RND2P52198 227 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 BPIFB3P59826 476 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 KLRD1Q13241 179 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 RNF212Q495C1 297 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 AKIRIN2Q53H80 203 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 FAM78BQ5VT40 261 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 C10orf113Q5VZT2 155 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 CST9LP1Q5W188 147 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 SPNS3Q6ZMD2 512 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 PQLC2Q6ZP29 291 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 OR51G1Q8NGK1 321 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 TMEM190Q8WZ59 177 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 ARPC1AQ92747 370 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 RPUSD4Q96CM3 377 aaKnown RBP3.5□□□□□ -1.85
SRP54-212ENST00000556992 SMIM7Q9BQ49 75 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 FNDC4Q9H6D8 234 aaPredicted RBP3.5□□□□□ -1.85
SRP54-212ENST00000556992 SDF2L1Q9HCN8 221 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 DOK5Q9P104 306 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 RNF24Q9Y225 148 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 ARHGAP21Q5T5U3 1957 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 ROS1P08922 2347 aa3.5□□□□□ -1.85
SRP54-212ENST00000556992 A0A087WYN8 130 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 IGHV4-61A0A0C4DH41 118 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 CLDN34H7C241 214 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 J3QLI3 93 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 NDUFB4O95168 129 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 HLA-DRB1P01911 266 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MSMBP08118 114 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 OR5G3P0C626 314 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 ARL14EPLP0DKL9 152 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 CTRB1P17538 263 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 CD24P25063 80 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MT3P25713 68 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 S100A7P31151 101 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MFAP2P55001 183 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MFAP4P55083 255 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 PLP1P60201 277 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 ZNF90Q03938 601 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 CLEC12BQ2HXU8 276 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 ZNF674Q2M3X9 581 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 FAM120AOSQ5T036 256 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 FAM90A2PQ658T7 463 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 CTRB2Q6GPI1 263 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MIR17HGQ75NE6 70 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 DYNAPQ8N1N2 210 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 C11orf44Q8N8P7 122 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 Q8WTZ3 238 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 TMEM37Q8WXS4 190 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 PERPQ96FX8 193 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 TXN2Q99757 166 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 SSX3Q99909 188 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 TCEAL7Q9BRU2 100 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 C20orf24Q9BUV8 137 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 BEX4Q9NWD9 120 aaPredicted RBP3.49□□□□□ -1.85
SRP54-212ENST00000556992 GAR1Q9NY12 217 aaKnown RBP3.49□□□□□ -1.85
SRP54-212ENST00000556992 MLXQ9UH92 298 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 F8P00451 2351 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 PRR14LQ5THK1 2151 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 PLCE1Q9P212 2302 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 MYO7BQ6PIF6 2116 aa3.49□□□□□ -1.85
SRP54-212ENST00000556992 IGLV11-55A0A075B6I3 123 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 IGKV1D-37A0A075B6S9 117 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 IGHV4-30-2A0A087WSY4 118 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 PSMB11A5LHX3 300 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms