RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 HOXA6P31267 233 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 SRP14P37108 136 aaKnown RBP0.3□□□□□ -2.36
LINC00871-202ENST00000556071 LINC00575Q6W349 94 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 NIT2Q9NQR4 276 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 TNFSF18Q9UNG2 199 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 PHRF1Q9P1Y6 1649 aaKnown RBP0.3□□□□□ -2.36
LINC00871-202ENST00000556071 PTPRFP10586 1907 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 ASH1LQ9NR48 2969 aaKnown RBP0.3□□□□□ -2.36
LINC00871-202ENST00000556071 TNS3Q68CZ2 1445 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 SIP14410 1827 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 M0R378 163 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 NIPSNAP2O75323 286 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 RPP14O95059 124 aaKnown RBP0.29□□□□□ -2.36
LINC00871-202ENST00000556071 IGLV3-1P01715 115 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 CD2P06729 351 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 CIRBPQ14011 172 aaKnown RBP0.29□□□□□ -2.36
LINC00871-202ENST00000556071 C2orf82Q6UX34 121 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 OR51A2Q8NGJ7 313 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 PRRT1Q99946 306 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 GLTPQ9NZD2 209 aa0.29□□□□□ -2.36
LINC00871-202ENST00000556071 ROMO1P60602 79 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 LSM6P62312 80 aaKnown RBP0.28□□□□□ -2.36
LINC00871-202ENST00000556071 HIST1H3AP68431 136 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 H3F3AP84243 136 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 SPINK9Q5DT21 86 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 HAGHLQ6PII5 290 aaPredicted RBP0.28□□□□□ -2.36
LINC00871-202ENST00000556071 ZNF833PQ6ZTB9 187 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 PDZD9Q8IXQ8 264 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 TMEM126AQ9H061 195 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 RTL1A6NKG5 1358 aa0.28□□□□□ -2.36
LINC00871-202ENST00000556071 KIF1BO60333 1816 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 TCRBP04435 133 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 KRTAP2-3P0C7H8 128 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 KRR1Q13601 381 aaKnown RBP0.27□□□□□ -2.37
LINC00871-202ENST00000556071 LYRM7Q5U5X0 104 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 GRINAQ7Z429 371 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 OR8J2Q8NGG1 315 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 LINC00467Q9BRT7 94 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 KRTAP2-4Q9BYR9 128 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 KRTAP2-1Q9BYU5 128 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 PCTPQ9UKL6 214 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 TNCP24821 2201 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 KNTC1P50748 2209 aa0.27□□□□□ -2.37
LINC00871-202ENST00000556071 IGLV3-32A0A0A0MS00 114 aa0.26□□□□□ -2.37
LINC00871-202ENST00000556071 TRAV10A0A0B4J240 114 aa0.26□□□□□ -2.37
LINC00871-202ENST00000556071 ARL5BQ96KC2 179 aa0.26□□□□□ -2.37
LINC00871-202ENST00000556071 KDM6AO15550 1401 aaPredicted RBP0.26□□□□□ -2.37
LINC00871-202ENST00000556071 MAST4O15021 2626 aa0.26□□□□□ -2.37
LINC00871-202ENST00000556071 ZFYVE9O95405 1425 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 TRGV10A0A0A0MS01 117 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 A8MWV9 139 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 NDUFB3O43676 98 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 CEBPGP53567 150 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 TMEM97Q5BJF2 176 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 C4orf22Q6V702 233 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 OR10K1Q8NGX5 313 aa0.25□□□□□ -2.37
LINC00871-202ENST00000556071 B4DSR2 109 aa0.24□□□□□ -2.37
LINC00871-202ENST00000556071 PIGPP57054 158 aa0.24□□□□□ -2.37
LINC00871-202ENST00000556071 ITGB3BPQ13352 177 aaPredicted RBP0.24□□□□□ -2.37
LINC00871-202ENST00000556071 OR5D14Q8NGL3 314 aa0.24□□□□□ -2.37
LINC00871-202ENST00000556071 CECR2Q9BXF3 1484 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 CCDC144AA2RUR9 1427 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 NCOA1Q15788 1441 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 F8W1H4 67 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 HAND1O96004 215 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 SERPINB9P50453 376 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 RRN3P1Q2M238 152 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 C22orf39Q6P5X5 142 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 PSMF1Q92530 271 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 SLC25A21Q9BQT8 299 aaPredicted RBP0.23□□□□□ -2.37
LINC00871-202ENST00000556071 PLAC8Q9NZF1 115 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 LY96Q9Y6Y9 160 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 ARHGEF11O15085 1522 aa0.23□□□□□ -2.37
LINC00871-202ENST00000556071 TRAV4A0A0B4J268 109 aa0.22□□□□□ -2.37
LINC00871-202ENST00000556071 E7EUB6 86 aa0.22□□□□□ -2.37
LINC00871-202ENST00000556071 H3BRM9 83 aa0.22□□□□□ -2.37
LINC00871-202ENST00000556071 DSCR4P56555 118 aaPredicted RBP0.22□□□□□ -2.37
LINC00871-202ENST00000556071 TEN1Q86WV5 123 aa0.22□□□□□ -2.37
LINC00871-202ENST00000556071 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 K7EIL1 84 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 ERP29P30040 261 aaKnown RBP0.21□□□□□ -2.38
LINC00871-202ENST00000556071 Q8TAT8 98 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 CANT1Q8WVQ1 401 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 YPEL2Q96QA6 119 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 LYSMD1Q96S90 227 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 TMEM138Q9NPI0 162 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 DOCK4Q8N1I0 1966 aa0.21□□□□□ -2.38
LINC00871-202ENST00000556071 MYO5AQ9Y4I1 1855 aaKnown RBP0.2□□□□□ -2.38
LINC00871-202ENST00000556071 PARVBQ9HBI1 364 aa0.2□□□□□ -2.38
LINC00871-202ENST00000556071 FMN1Q68DA7 1419 aa0.2□□□□□ -2.38
LINC00871-202ENST00000556071 PLB1Q6P1J6 1458 aa0.19□□□□□ -2.38
LINC00871-202ENST00000556071 ERC2-IT1O76042 136 aa0.19□□□□□ -2.38
LINC00871-202ENST00000556071 MED29Q9NX70 200 aa0.19□□□□□ -2.38
LINC00871-202ENST00000556071 COX7CP15954 63 aa0.18□□□□□ -2.38
LINC00871-202ENST00000556071 SPINK7P58062 85 aa0.18□□□□□ -2.38
LINC00871-202ENST00000556071 BCL2L15Q5TBC7 163 aa0.18□□□□□ -2.38
LINC00871-202ENST00000556071 C1orf134Q5TEV5 83 aa0.18□□□□□ -2.38
LINC00871-202ENST00000556071 EXOC3-AS1Q8N2X6 119 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms