RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 BUB1B-PAK6H3BSN5 160 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 SMIM17P0DL12 118 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 PRSS8Q16651 343 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 TCTEX1D1Q8N7M0 179 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 C14orf144Q96I85 54 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 PARD6GQ9BYG4 376 aaPredicted RBP8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 PITPNC1Q9UKF7 332 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 TMEM189A5PLL7 270 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 LINC00587B1AMM8 73 aa8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 HNRNPA3P51991 378 aaKnown RBP8.72□□□□□ -1.01
TGFBR1-209ENST00000552516 CFPP27918 469 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 ADMP35318 185 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 SELENOTP62341 195 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 FAM120AOSQ5T036 256 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 LRP4O75096 1905 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 RNF223E7ERA6 249 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 C1orf229Q6ZS94 237 aaPredicted RBP8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 TEX45Q8NA69 505 aa8.71□□□□□ -1.01
TGFBR1-209ENST00000552516 ZFHX4Q86UP3 3567 aa8.71□□□□□ -1.02
TGFBR1-209ENST00000552516 CORTO00230 105 aa8.71□□□□□ -1.02
TGFBR1-209ENST00000552516 GCGP01275 180 aa8.71□□□□□ -1.02
TGFBR1-209ENST00000552516 SIGLEC9Q9Y336 463 aa8.71□□□□□ -1.02
TGFBR1-209ENST00000552516 METTL26Q96S19 204 aa8.71□□□□□ -1.02
TGFBR1-209ENST00000552516 SHISA9B4DS77 424 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 ATP5G2Q06055 141 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 RNF182Q8N6D2 247 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 ANAPC10Q9UM13 185 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 RNASE2P10153 161 aaKnown RBP8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 TMEM95Q3KNT9 176 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 FAM90A2PQ658T7 463 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 RNF125Q96EQ8 232 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 SERF1AO75920 110 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 EVI2AP22794 236 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 NPPCP23582 126 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 MAS1LP35410 378 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 FAM71F2Q6NXP2 309 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 FBLL1A6NHQ2 334 aaKnown RBP8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 HLA-DRB1P01911 266 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 VAMP3Q15836 100 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 Q8TCH9 128 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
TGFBR1-209ENST00000552516 LMO1P25800 156 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 NMUP48645 174 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 IL15RAQ13261 267 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 ZNF600Q6ZNG1 722 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 HCFC1P51610 2035 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 IGLV2-14P01704 120 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 SFTPCP11686 197 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 CKS2P33552 79 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 DUX3Q96PT4 197 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 A8MWL6 223 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 NCR2O95944 276 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 EMP1P54849 157 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 BEX4Q9NWD9 120 aaPredicted RBP8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 FAM209BQ5JX69 171 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 TCRBV4S1A1TA0A5B7 111 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 PROP1O75360 226 aa8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 SOX21Q9Y651 276 aaPredicted RBP8.69□□□□□ -1.02
TGFBR1-209ENST00000552516 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 GPX1P07203 203 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 HLA-DMBP28068 263 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 CDX1P47902 265 aaPredicted RBP8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 TPTE2P1Q5T6R2 138 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 NEU4Q8WWR8 484 aaPredicted RBP8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 FNDC4Q9H6D8 234 aaPredicted RBP8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 STAG3L2P0CL84 134 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 STAG3L3P0CL85 134 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 LCN12Q6JVE5 192 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 TEX38Q6PEX7 206 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 SLX1AQ9BQ83 275 aa8.68□□□□□ -1.02
TGFBR1-209ENST00000552516 ERCC8Q13216 396 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 NUP37Q8NFH4 326 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 SLC25A39Q9BZJ4 359 aaPredicted RBP8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 DEFB1P60022 68 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 SMKR1H3BMG3 65 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 TMEM116Q8NCL8 245 aa8.67□□□□□ -1.02
TGFBR1-209ENST00000552516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms