RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 CCL16O15467 120 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 PDE6DO43924 150 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 RPP14O95059 124 aaKnown RBP0.22□□□□□ -2.37
GPN3-209ENST00000551079 HAND1O96004 215 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 CDKN2CP42773 168 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 OMPP47874 163 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 ATP5G3P48201 142 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 ERVS71-1P61550 626 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 RHOBP62745 196 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 SLC30A7Q8NEW0 376 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 Q8TAT8 98 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 C2orf50Q96LR7 162 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 CMSS1Q9BQ75 279 aaKnown RBP0.22□□□□□ -2.37
GPN3-209ENST00000551079 TMEM126AQ9H061 195 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 GLTPQ9NZD2 209 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 TMEM14CQ9P0S9 112 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 FBXO5Q9UKT4 447 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 PTPRDP23468 1912 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 ARHGEF11O15085 1522 aa0.22□□□□□ -2.37
GPN3-209ENST00000551079 COL24A1Q17RW2 1714 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 FAM159BA6NKW6 160 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 TMEM114B3SHH9 223 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 TIMM17BO60830 172 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 DHFRP00374 187 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 C8GP07360 202 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 ANP32AP39687 249 aaKnown RBP0.21□□□□□ -2.38
GPN3-209ENST00000551079 PIGPP57054 158 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 ROMO1P60602 79 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 EDDM3AQ14507 147 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 PDZD9Q8IXQ8 264 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 PLPP5Q8NEB5 264 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 OR2T10Q8NGZ9 312 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 BORCS7Q96B45 105 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 SIGMAR1Q99720 223 aa0.21□□□□□ -2.38
GPN3-209ENST00000551079 TLCD2A6NGC4 264 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 IGLV1-51P01701 117 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 PPIBP23284 216 aaKnown RBP0.2□□□□□ -2.38
GPN3-209ENST00000551079 TMEM97Q5BJF2 176 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 C1orf134Q5TEV5 83 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 EXOC3-AS1Q8N2X6 119 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 OR2T35Q8NGX2 323 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 GGACTQ9BVM4 153 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 KIFC1Q9BW19 673 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 TRIM4Q9C037 500 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 PSTPIP2Q9H939 334 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 NCOA1Q15788 1441 aa0.2□□□□□ -2.38
GPN3-209ENST00000551079 CECR2Q9BXF3 1484 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 IGHV1-58A0A0C4DH39 117 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 TCRBV4S1A1TA0A5B7 111 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 OR2T8A6NH00 312 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 TMEM256-PLSCR3K7ERE1 68 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 M0R378 163 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 NDUFB3O43676 98 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 NUPR1O60356 82 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 AP3S2P59780 193 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 KRTAP26-1Q6PEX3 210 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 TMEM254Q8TBM7 123 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 FAM172AQ8WUF8 416 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 LINC00052Q96N35 136 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 PRRT1Q99946 306 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 RNF122Q9H9V4 155 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 TVP23BQ9NYZ1 205 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 PCTPQ9UKL6 214 aa0.19□□□□□ -2.38
GPN3-209ENST00000551079 ASH1LQ9NR48 2969 aaKnown RBP0.19□□□□□ -2.38
GPN3-209ENST00000551079 CAMSAP1Q5T5Y3 1602 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 SMIM23A6NLE4 172 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 J3QRK9 145 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 TAX1BP3O14907 124 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 OR7C1O76099 320 aaPredicted RBP0.18□□□□□ -2.38
GPN3-209ENST00000551079 CTXN2P0C2S0 81 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 ERP29P30040 261 aaKnown RBP0.18□□□□□ -2.38
GPN3-209ENST00000551079 EIF5AP63241 154 aaKnown RBP0.18□□□□□ -2.38
GPN3-209ENST00000551079 HIST1H3AP68431 136 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 CCL7P80098 99 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 H3F3AP84243 136 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 RRN3P1Q2M238 152 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 LINC00575Q6W349 94 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 ZNF833PQ6ZTB9 187 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 ST6GALNAC3Q8NDV1 305 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 OR10K1Q8NGX5 313 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 ZC2HC1AQ96GY0 325 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 GPER1Q99527 375 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 ENY2Q9NPA8 101 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 MED29Q9NX70 200 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 FAM32AQ9Y421 112 aaKnown RBP0.18□□□□□ -2.38
GPN3-209ENST00000551079 TNS3Q68CZ2 1445 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
GPN3-209ENST00000551079 CEP164Q9UPV0 1460 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 TNCP24821 2201 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 TRAV10A0A0B4J240 114 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 A0A0D9SG42 100 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 K7ERJ3 54 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 HMGB3O15347 200 aaKnown RBP0.17□□□□□ -2.38
GPN3-209ENST00000551079 KDM6AO15550 1401 aaPredicted RBP0.17□□□□□ -2.38
GPN3-209ENST00000551079 CST8O60676 142 aa0.17□□□□□ -2.38
GPN3-209ENST00000551079 SRP14P37108 136 aaKnown RBP0.17□□□□□ -2.38
GPN3-209ENST00000551079 CEBPGP53567 150 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms