RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 ZNF883P0CG24 379 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 CSN1S1P47710 185 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 PRNTQ86SH4 94 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 S100A7P31151 101 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 FOXE3Q13461 319 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 RUSC1-AS1Q66K80 236 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
SRP54-202ENST00000546080 HEATR1Q9H583 2144 aaKnown RBP11.36□□□□□ -0.59
SRP54-202ENST00000546080 M0R296 226 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 NCR2O95944 276 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 IGHV1-46P01743 117 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 RIGQ13278 110 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
SRP54-202ENST00000546080 SLC25A17O43808 307 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 CCL3L1P16619 93 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 VMA21Q3ZAQ7 101 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 A6NDN8 102 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 SAP30O75446 220 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 CRYGCP07315 174 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 C8orf46Q8TAG6 207 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 SRSF12Q8WXF0 261 aaKnown RBP11.35□□□□□ -0.59
SRP54-202ENST00000546080 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
SRP54-202ENST00000546080 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 H3BRM9 83 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 DIAPH2-AS1Q14236 149 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 TIMM23BQ5SRD1 257 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 ARRDC1-AS1Q9H2J1 176 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 HIGD1AQ9Y241 93 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 CCL11P51671 97 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 MEF2CQ06413 473 aaPredicted RBP11.34□□□□□ -0.59
SRP54-202ENST00000546080 TEX36Q5VZQ5 186 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 DPF1Q92782 380 aa11.34□□□□□ -0.59
SRP54-202ENST00000546080 FGF6P10767 208 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 RIPPLY3P57055 190 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 NHLH1Q02575 133 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 DHRS13Q6UX07 377 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 A0A1B0GW15 77 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 OVOL3O00110 214 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 PLP1P60201 277 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 LYZP61626 148 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 Q71RC1 249 aaPredicted RBP11.33□□□□□ -0.6
SRP54-202ENST00000546080 RPRMLQ8N4K4 120 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 OR1N2Q8NGR9 330 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
SRP54-202ENST00000546080 H3BUT2 72 aa11.32□□□□□ -0.6
SRP54-202ENST00000546080 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
SRP54-202ENST00000546080 K7EP34 96 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 APELAP0DMC3 54 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 IFI27P40305 119 aaPredicted RBP11.31□□□□□ -0.6
SRP54-202ENST00000546080 TPPP3Q9BW30 176 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 DYSFO75923 2080 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 KLK10O43240 276 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 ENSAO43768 121 aaKnown RBP11.31□□□□□ -0.6
SRP54-202ENST00000546080 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
SRP54-202ENST00000546080 RPL27AP46776 148 aaKnown RBP11.31□□□□□ -0.6
SRP54-202ENST00000546080 HSD52Q0P140 79 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 KIR3DS1Q14943 382 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
SRP54-202ENST00000546080 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 TNFRSF1AP19438 455 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 PAX2Q02962 417 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 BOD1L2Q8IYS8 172 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 RITA1Q96K30 269 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 SLC25A39Q9BZJ4 359 aaPredicted RBP11.3□□□□□ -0.6
SRP54-202ENST00000546080 TMEM14CQ9P0S9 112 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 HILPDAQ9Y5L2 63 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 URB1O60287 2271 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms