RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 F2Z2F3 143 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 HAX1O00165 279 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 CHEK1O14757 476 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 NDUFA3O95167 84 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 PLAUP00749 431 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 IGHV3-48P01763 117 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 FAM87AP0C7U9 286 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 COL8A2P25067 703 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 GNG5P63218 68 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 SPATA45Q537H7 98 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 YLPM1P49750 1951 aaKnown RBP10.37□□□□□ -0.75
CPSF7-223ENST00000544669 EREGO14944 169 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 HOXB4P17483 251 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-223ENST00000544669 COX7A1P24310 79 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 CAMPP49913 170 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 RIGQ13278 110 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 Q86TA4 180 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 NIT1Q86X76 327 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 IGFBPL1Q8WX77 278 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 ONECUT1Q9UBC0 465 aa10.37□□□□□ -0.75
CPSF7-223ENST00000544669 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 NPIPB5A8MRT5 1133 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 NTF3P20783 257 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 PRTN3P24158 256 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 CTRLP40313 264 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 MFAP4P55083 255 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 PSG9Q00887 426 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 KIR3DL3Q8N743 410 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 AAMDCQ9H7C9 122 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 CACNA1HO95180 2353 aa10.36□□□□□ -0.75
CPSF7-223ENST00000544669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
CPSF7-223ENST00000544669 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 H3BRN7 92 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 RNF224P0DH78 156 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 CNTFRP26992 372 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 CSN1S1P47710 185 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 GAGE1Q13065 139 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 MINOS1Q5TGZ0 78 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 Q8N976 141 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 TXN2Q99757 166 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 MINOS1-NBL1R4GNA1 71 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 LOC105371242A0A075B767 164 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 TIMM23O14925 209 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 CT45A10P0DMU9 189 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 RNASEKQ6P5S7 137 aaKnown RBP10.35□□□□□ -0.75
CPSF7-223ENST00000544669 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
CPSF7-223ENST00000544669 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
CPSF7-223ENST00000544669 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 K7EIM0 57 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
CPSF7-223ENST00000544669 GNG7O60262 68 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 IGKV1-17P01599 117 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 IGLC2P0DOY2 106 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 FOSL1P15407 271 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 KLRB1Q12918 225 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 FOXC1Q12948 553 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 CIARTQ8N365 385 aaPredicted RBP10.34□□□□□ -0.75
CPSF7-223ENST00000544669 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 ZNF318Q5VUA4 2279 aa10.34□□□□□ -0.75
CPSF7-223ENST00000544669 A0A1B0GUT8 65 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 CCL21O00585 134 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 CD33P20138 364 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 RAB9AP51151 201 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 HNRNPA3P51991 378 aaKnown RBP10.33□□□□□ -0.76
CPSF7-223ENST00000544669 PSG3Q16557 428 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 LINC01560Q8TB33 94 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 LOC102724200A0A096LPH7 203 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-223ENST00000544669 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 LINC00614P0C842 121 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 RPL7P18124 248 aaKnown RBP10.33□□□□□ -0.76
CPSF7-223ENST00000544669 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 GDF5OSQ5U4N7 250 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 GOLT1AQ6ZVE7 132 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 TCF24Q7RTU0 167 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 PRNTQ86SH4 94 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 ZNF491Q8N8L2 437 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 PGLYRP4Q96LB8 373 aa10.33□□□□□ -0.76
CPSF7-223ENST00000544669 DMDP11532 3685 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 SVILO95425 2214 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 TNCP24821 2201 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 ODF3BA8MYP8 253 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 RPS20P60866 119 aaKnown RBP10.32□□□□□ -0.76
CPSF7-223ENST00000544669 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 GTSF1Q8WW33 167 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 CFHR4Q92496 578 aa10.32□□□□□ -0.76
CPSF7-223ENST00000544669 PSG8Q9UQ74 426 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms