RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ZNF414Q96IQ9 312 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 C20orf24Q9BUV8 137 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 MRPL32Q9BYC8 188 aaKnown RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 SLC25A22Q9H936 323 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 MRPL27Q9P0M9 148 aaKnown RBP8.2□□□□□ -1.1
DDB1-221ENST00000543162 RABAC1Q9UI14 185 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 FUT9Q9Y231 359 aa8.2□□□□□ -1.1
DDB1-221ENST00000543162 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 LINC01619G3V211 115 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 NMBP08949 121 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 H2AFB1P0C5Y9 115 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 S100A7P31151 101 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
DDB1-221ENST00000543162 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 LCN15Q6UWW0 184 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 LINC00305Q7Z4B0 112 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 GPHB5Q86YW7 130 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 OR11H1Q8NG94 326 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 UHRF2Q96PU4 802 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
DDB1-221ENST00000543162 ATRQ13535 2644 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 MAP1LC3B2A6NCE7 125 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 TEX46H3BTG2 121 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
DDB1-221ENST00000543162 ZNF207O43670 478 aaKnown RBP8.18□□□□□ -1.1
DDB1-221ENST00000543162 EIF3GO75821 320 aaKnown RBP eCLIP8.18□□□□□ -1.1
DDB1-221ENST00000543162 TAS2R45P59539 299 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 SSX7Q7RTT5 188 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 MBD3L1Q8WWY6 194 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 DUX3Q96PT4 197 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 METTL26Q96S19 204 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 SLC25A39Q9BZJ4 359 aaPredicted RBP8.18□□□□□ -1.1
DDB1-221ENST00000543162 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
DDB1-221ENST00000543162 TECRQ9NZ01 308 aaKnown RBP8.18□□□□□ -1.1
DDB1-221ENST00000543162 TRAV1-1A0A0B4J248 108 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 TRAV5A0A0B4J249 113 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 A0A1B0GV50 99 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 H3BRN7 92 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 CCL24O00175 119 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 HBE1P02100 147 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 C8orf88P0DMB2 117 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 NPPCP23582 126 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 SLURP1P55000 103 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 SYNJ2BPP57105 145 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 KHDC3LQ587J8 217 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 C1QL4Q86Z23 238 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 NARS2Q96I59 477 aaKnown RBP8.17□□□□□ -1.1
DDB1-221ENST00000543162 RAX2Q96IS3 184 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 HRH4Q9H3N8 390 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 UFC1Q9Y3C8 167 aa8.17□□□□□ -1.1
DDB1-221ENST00000543162 ZNF98A6NK75 572 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 K7EMT4 169 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 LGALS9O00182 355 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 OR7C2O60412 319 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 CXorf1O96002 111 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 STAG3L2P0CL84 134 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 STAG3L3P0CL85 134 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 ARL14EPLP0DKL9 152 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 CRYBB3P26998 211 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 FGF8P55075 233 aaPredicted RBP8.16□□□□□ -1.1
DDB1-221ENST00000543162 KLF5Q13887 457 aaPredicted RBP8.16□□□□□ -1.1
DDB1-221ENST00000543162 LEMD1Q68G75 181 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 REC114Q7Z4M0 266 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 IQCF2Q8IXL9 164 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 CITED1Q99966 193 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 SLC25A2Q9BXI2 301 aa8.16□□□□□ -1.1
DDB1-221ENST00000543162 DAZ1Q9NQZ3 744 aaKnown RBP8.16□□□□□ -1.1
DDB1-221ENST00000543162 IGHV3-49A0A0A0MS15 119 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 FHL3Q13643 280 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 TM4SF20Q53R12 229 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 IL34Q6ZMJ4 242 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 PQLC2Q6ZP29 291 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 STXBP6Q8NFX7 210 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 LYPD6BQ8NI32 183 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 U3KQE9 123 aa8.15□□□□□ -1.1
DDB1-221ENST00000543162 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 IGHV7-4-1A0A0J9YVY3 117 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 A0A1W2PS18 150 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 A8MWP6 167 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 BUB3O43684 328 aa8.14□□□□□ -1.11
DDB1-221ENST00000543162 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms