RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PMS2P5A8MQ11 134 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 LYNX1G3V0Z9 82 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 SCGB1C2P0DMR2 95 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV1-8P0DP01 117 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 LYNX1P0DP58 116 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 METTL26Q96S19 204 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 F11RQ9Y624 299 aaKnown RBP6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 ANKHD1Q8IWZ3 2542 aaKnown RBP6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 ALKBH7Q9BT30 221 aaPredicted RBP6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 PKD1L2Q7Z442 2459 aa6.67□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV3OR16-13A0A075B7E8 117 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV3OR16-8A0A075B7F1 116 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV3-74A0A0B4J1X5 117 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 CD24P25063 80 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 TSPOP30536 169 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 GPR183P32249 361 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 PDLIM4P50479 330 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 PVRIGQ6DKI7 326 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 C16orf92Q96LL3 132 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 TECTAO75443 2155 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 MMP23AO75900 390 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV3-23P01764 117 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 GATA4P43694 442 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 FBLN7Q53RD9 439 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 DUX4L9Q6RFH8 374 aaPredicted RBP6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF841Q6ZN19 808 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 OR5AN1Q8NGI8 311 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 SLC25A39Q9BZJ4 359 aaPredicted RBP6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 C7orf71A4D174 169 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 NBR2O15453 112 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 MGPP08493 103 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 PLP1P60201 277 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF329Q86UD4 541 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 DCAF16Q9NXF7 216 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 C19orf67A6NJJ6 358 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 SRRM4A7MD48 611 aaKnown RBP6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 DLX6P56179 175 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 POU2AF1Q16633 256 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 MUC6Q6W4X9 2439 aa6.66□□□□□ -1.34
PRKAB1-207ENST00000542698 IGHV2-26A0A0B4J1V2 119 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 A0A1W2PPI3 338 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 K7EN84 100 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 TIMM23O14925 209 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 NUPR1O60356 82 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 UNQ6494/PRO21346Q6UXR6 183 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 UBTD1Q9HAC8 227 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 SIGLEC9Q9Y336 463 aa6.65□□□□□ -1.34
PRKAB1-207ENST00000542698 M0QZ24 198 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 IGLC2P0DOY2 106 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 IGLC3P0DOY3 106 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 PRB4P10163 310 aaPredicted RBP6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 SLAQ13239 276 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 WFDC3Q8IUB2 231 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 ARPC1AQ92747 370 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 IGHV1-3A0A0C4DH29 117 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 A0A1B0GWJ7 208 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 FABP5P3A8MUU1 101 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 SYS1-DBNDD2H3BUS1 97 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 ZNF138P52744 262 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 MPV17L2Q567V2 206 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 LYPD2Q6UXB3 125 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 Q6ZS92 163 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 MS4A6AQ9H2W1 248 aa6.65□□□□□ -1.35
PRKAB1-207ENST00000542698 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 hDV102S1A0JD36 115 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 ZNF207O43670 478 aaKnown RBP6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 TOMM40O96008 361 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 RPRMLQ8N4K4 120 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 KIR3DL3Q8N743 410 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 NUP37Q8NFH4 326 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 OR10J6PQ8NGY7 276 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 TRANK1O15050 2925 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 RANBP2P49792 3224 aaKnown RBP6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 HERVK_113P61574 105 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 SPOCK3Q9BQ16 436 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 TMEM160Q9NX00 188 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 SMIM27A0A1W2PRY6 76 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 NPIPB5A8MRT5 1133 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 Q1RN00 199 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 KLK15Q9H2R5 256 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 MRPS16Q9Y3D3 137 aaKnown RBP6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 PHLDA3Q9Y5J5 127 aa6.64□□□□□ -1.35
PRKAB1-207ENST00000542698 DNAH14Q0VDD8 3507 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms