RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LINC00052Q96N35 136 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SDHCQ99643 169 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SAV1Q9H4B6 383 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 IGKV1D-37A0A075B6S9 117 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 DUXBA0A1W2PPF3 345 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 TMEM189A5PLL7 270 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SMIM9A6NGZ8 99 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ZNF705FA8MVS1 300 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 IGKV3-20P01619 116 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ZNF705DP0CH99 300 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ZNF705BP0CI00 300 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SPART-AS1P0CW21 52 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 PSMB3P49720 205 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 LYZP61626 148 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 C1orf194Q5T5A4 169 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 FOXI2Q6ZQN5 318 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 TMED4Q7Z7H5 227 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 POM121L12Q8N7R1 296 aa14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 WDR12Q9GZL7 423 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1B-204ENST00000536782 DYNC1H1Q14204 4646 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SNRPGP15A8MWD9 76 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 FXYD7P58549 80 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 DEFB1P60022 68 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 COQ8AQ8NI60 647 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 C7orf50Q9BRJ6 194 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SCRT1Q9BWW7 348 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 MUC4Q99102 2169 aa14.1□□□□□ -0.15
TNFRSF1B-204ENST00000536782 IGHV3OR16-12A0A075B7B8 117 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 EMP1P54849 157 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 UBE2MP61081 183 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 LINC00299Q6ZSB3 139 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 OR4B1Q8NGF8 309 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 PPP1R14BQ96C90 147 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 CLUHP3Q96NS8 147 aa14.09□□□□□ -0.15
TNFRSF1B-204ENST00000536782 CENPXA8MT69 81 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SOCS3O14543 225 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 RAB11AP62491 216 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 OR2F1Q13607 317 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SPATA31B1PQ5VZV4 182 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 TRGV9Q99603 122 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 RFNGQ9Y644 331 aa14.08□□□□□ -0.16
TNFRSF1B-204ENST00000536782 ISLRO14498 428 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PITX3O75364 302 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 NDUFB6O95139 128 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SFT2D2O95562 160 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 IL7P13232 177 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 VAMP1P23763 118 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 OR8I2Q8N0Y5 310 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 ZNF709Q8N972 641 aa14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PAIP2BQ9ULR5 123 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PKD1P98161 4303 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 TEX48A0A1B0GUV7 120 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 IAPPP10997 89 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PPP1R1AQ13522 171 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SAMD13Q5VXD3 122 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 EBLN2Q6P2I7 272 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SLC35B3Q9H1N7 401 aa14.06□□□□□ -0.16
TNFRSF1B-204ENST00000536782 DNAH11Q96DT5 4516 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 CFDP00746 253 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 SLC25A6P12236 298 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PAX9P55771 341 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 PSG9Q00887 426 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 CNPY1Q3B7I2 92 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 FAM78BQ5VT40 261 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 DKK2Q9UBU2 259 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 GOLT1BQ9Y3E0 138 aa14.05□□□□□ -0.16
TNFRSF1B-204ENST00000536782 IGKV1OR2-108A0A075B7D4 117 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 A6NHS1 94 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 F6UB75 175 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 MED6O75586 246 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 BTCP35070 178 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 MEOX2P50222 304 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 RPP30P78346 268 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 FAM222AQ5U5X8 452 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 GGNBP1Q5YKI7 109 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 GSG1LQ6UXU4 331 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 THAP8Q8NA92 274 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 FAM210BQ96KR6 192 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 NIPSNAP3BQ9BS92 247 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 RPRMQ9NS64 109 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
TNFRSF1B-204ENST00000536782 A0A0J9YX75 114 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 A0A1B0GVY2 172 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 M0R2N4 97 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 IFNA21P01568 189 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 HBE1P02100 147 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 GALR1P47211 349 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 C16orf92Q96LL3 132 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 CCDC32Q9BV29 185 aa14.03□□□□□ -0.16
TNFRSF1B-204ENST00000536782 LINC00854A0A1B0GVQ3 168 aa14.02□□□□□ -0.17
TNFRSF1B-204ENST00000536782 UBE2DNLQ8IWF7 75 aa14.02□□□□□ -0.17
TNFRSF1B-204ENST00000536782 C1orf158Q8N1D5 194 aa14.02□□□□□ -0.17
TNFRSF1B-204ENST00000536782 SLC45A2Q9UMX9 530 aa14.02□□□□□ -0.17
TNFRSF1B-204ENST00000536782 C9orf170A2RU37 121 aa14.01□□□□□ -0.17
TNFRSF1B-204ENST00000536782 PRSS29PA6NIE9 313 aa14.01□□□□□ -0.17
TNFRSF1B-204ENST00000536782 SYNGR2O43760 224 aa14.01□□□□□ -0.17
TNFRSF1B-204ENST00000536782 OXA1LQ15070 435 aa14.01□□□□□ -0.17
TNFRSF1B-204ENST00000536782 LGALS9BQ3B8N2 356 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms