RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 S100A5P33763 92 aa12.8□□□□□ -0.36
PCF11-206ENST00000533018 EBLN2Q6P2I7 272 aa12.8□□□□□ -0.36
PCF11-206ENST00000533018 CIB3Q96Q77 187 aaPredicted RBP12.8□□□□□ -0.36
PCF11-206ENST00000533018 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
PCF11-206ENST00000533018 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
PCF11-206ENST00000533018 SLC25A22Q9H936 323 aa12.8□□□□□ -0.36
PCF11-206ENST00000533018 SFT2D2O95562 160 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 HOXB5P09067 269 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 SLC25A6P12236 298 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
PCF11-206ENST00000533018 LRTM2Q8N967 370 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 TRIM63Q969Q1 353 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 C16orf92Q96LL3 132 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 NEU1Q99519 415 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 C7orf50Q9BRJ6 194 aaKnown RBP12.79□□□□□ -0.36
PCF11-206ENST00000533018 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
PCF11-206ENST00000533018 HERC2O95714 4834 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 F6UB75 175 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 ISLRO14498 428 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 SYNGR2O43760 224 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 PPP1R1AQ13522 171 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 SPANXN5Q5MJ07 72 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 GGNBP1Q5YKI7 109 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 SLC35B3Q9H1N7 401 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 RFNGQ9Y644 331 aa12.78□□□□□ -0.36
PCF11-206ENST00000533018 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
PCF11-206ENST00000533018 SOCS3O14543 225 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.37
PCF11-206ENST00000533018 AMBPP02760 352 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
PCF11-206ENST00000533018 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
PCF11-206ENST00000533018 P0DMU3 169 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 FAM231AP0DMU4 169 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 FAM231CP0DMU5 169 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 ORM2P19652 201 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 GALR1P47211 349 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 PSG9Q00887 426 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 AKR1C1Q04828 323 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 FAM78BQ5VT40 261 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 THAP8Q8NA92 274 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 RSG1Q9BU20 258 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 RPRMQ9NS64 109 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 GOLT1BQ9Y3E0 138 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 V9GYH0 126 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 DNAH2Q9P225 4427 aa12.77□□□□□ -0.37
PCF11-206ENST00000533018 H3BP45 60 aa12.76□□□□□ -0.37
PCF11-206ENST00000533018 GATA2P23769 480 aaPredicted RBP12.76□□□□□ -0.37
PCF11-206ENST00000533018 MEOX2P50222 304 aa12.76□□□□□ -0.37
PCF11-206ENST00000533018 SAMD13Q5VXD3 122 aa12.76□□□□□ -0.37
PCF11-206ENST00000533018 ZNF709Q8N972 641 aa12.76□□□□□ -0.37
PCF11-206ENST00000533018 BPIFCQ8NFQ6 507 aa12.76□□□□□ -0.37
PCF11-206ENST00000533018 INPP1P49441 399 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 ZNF79Q15937 498 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 OR1B1Q8NGR6 318 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 CLUHP3Q96NS8 147 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
PCF11-206ENST00000533018 STRAPQ9Y3F4 350 aaKnown RBP12.75□□□□□ -0.37
PCF11-206ENST00000533018 KIAA1109Q2LD37 5005 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 A0A0J9YX75 114 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 SMCO3A2RU48 225 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 ZNF98A6NK75 572 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 HBE1P02100 147 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 S100A7P31151 101 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 PAX9P55771 341 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 FGL1Q08830 312 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 DEDD2Q8WXF8 326 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 C20orf173Q96LM9 149 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 NIPSNAP3BQ9BS92 247 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 DOK5Q9P104 306 aa12.74□□□□□ -0.37
PCF11-206ENST00000533018 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 M0R2N4 97 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 IFNA21P01568 189 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 HTN3P15516 51 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 SPANXN2Q5MJ10 180 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 TMEM182Q6ZP80 229 aaPredicted RBP12.73□□□□□ -0.37
PCF11-206ENST00000533018 ACOT7LQ6ZUV0 252 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 DKK2Q9UBU2 259 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 SLC45A2Q9UMX9 530 aa12.73□□□□□ -0.37
PCF11-206ENST00000533018 LOC102723971A0A1B0GUV8 181 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 PRSS46E5RG02 174 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 ADAP1O75689 374 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 UBE2DNLQ8IWF7 75 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
PCF11-206ENST00000533018 IL5P05113 134 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 UBE2MP61081 183 aaKnown RBP12.71□□□□□ -0.37
PCF11-206ENST00000533018 POLR2GP62487 172 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCF11-206ENST00000533018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 LINC00336Q6ZUF6 198 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms