RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ATRXP46100 2492 aa13.29□□□□□ -0.28
PCDHA3-201ENST00000522353 FAM208BQ5VWN6 2430 aa13.29□□□□□ -0.28
PCDHA3-201ENST00000522353 TRBV7-9A0A0J9YWB2 115 aa13.29□□□□□ -0.28
PCDHA3-201ENST00000522353 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
PCDHA3-201ENST00000522353 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
PCDHA3-201ENST00000522353 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
PCDHA3-201ENST00000522353 GGTLC1Q9BX51 225 aa13.28□□□□□ -0.28
PCDHA3-201ENST00000522353 FGF16O43320 207 aa13.28□□□□□ -0.28
PCDHA3-201ENST00000522353 KLF17Q5JT82 389 aaPredicted RBP13.28□□□□□ -0.28
PCDHA3-201ENST00000522353 LDLRAD4O15165 306 aa13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 KIR3DL3Q8N743 410 aa13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 LINC00477Q96M19 166 aa13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 SCN8AQ9UQD0 1980 aa13.27□□□□□ -0.28
PCDHA3-201ENST00000522353 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 C14orf144Q96I85 54 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 J3QLI3 93 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 HBDP02042 147 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 ZNF138P52744 262 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 FAM19A2Q8N3H0 131 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 BEND2Q8NDZ0 799 aa13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
PCDHA3-201ENST00000522353 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 TTC32Q5I0X7 151 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 ACTL10Q5JWF8 245 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 SLC25A20O43772 301 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 INSP01308 110 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 CR1LQ2VPA4 569 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 ITGB1BP1O14713 200 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 RHPN1-AS1Q9BWJ2 59 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 IGHV1-69DA0A0B4J2H0 117 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 TNFSF13O75888 250 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 SERF1AO75920 110 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 IGHV1-69P01742 117 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 CD28P10747 220 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 OCC1Q8TAD7 63 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 NRN1Q9NPD7 142 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
PCDHA3-201ENST00000522353 NDUFA3O95167 84 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 WFDC1Q9HC57 220 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 FER1L5A0AVI2 2057 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 ETV2O00321 342 aaPredicted RBP13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 GATA4P43694 442 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 ATRAIDQ6UW56 229 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 Q6ZS49 121 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 Q8TCH9 128 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 RPRMLQ8N4K4 120 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 RFNGQ9Y644 331 aa13.25□□□□□ -0.29
PCDHA3-201ENST00000522353 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 ZNF562Q6V9R5 426 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 GNB1LQ9BYB4 327 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 FCN3O75636 299 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 ZNF407Q9C0G0 2248 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 SSBP4Q9BWG4 385 aaPredicted RBP13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 IGKV2-40A0A087WW87 121 aaPredicted RBP13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 IGKV2D-40P01614 121 aaPredicted RBP13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 NDPQ00604 133 aa13.24□□□□□ -0.29
PCDHA3-201ENST00000522353 ZFHX2Q9C0A1 2572 aaPredicted RBP13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 IGKV1-5P01602 117 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 LINC00614P0C842 121 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 TCF20Q9UGU0 1960 aaKnown RBP13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 IGKV3D-20A0A0C4DH25 116 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 OVOL3O00110 214 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 NMSQ5H8A3 153 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 TRAV1-1A0A0B4J248 108 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 RNF182Q8N6D2 247 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 DPH3P1Q9H4G8 78 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 APOMO95445 188 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 ADMP35318 185 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 SYNJ2BPP57105 145 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 TMEM86BQ8N661 226 aa13.23□□□□□ -0.29
PCDHA3-201ENST00000522353 LINC00473A8K010 186 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 FNDC1Q4ZHG4 1894 aaPredicted RBP13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 IGHV2-70DA0A0C4DH43 119 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 SNAI2O43623 268 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 DPM2O94777 84 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 TMEM14EPQ6UXP3 125 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 MAPK1IP1LQ8NDC0 245 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 NOTCH2Q04721 2471 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 SUPT4H1P63272 117 aaKnown RBP13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 TOMM40O96008 361 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 RUSC1-AS1Q66K80 236 aa13.22□□□□□ -0.29
PCDHA3-201ENST00000522353 PSCAO43653 123 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 LINC01559Q495D7 138 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 ST6GALNAC6Q969X2 333 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 ASCL4Q6XD76 172 aa13.21□□□□□ -0.29
PCDHA3-201ENST00000522353 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms