RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DKK4Q9UBT3 224 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 DKK2Q9UBU2 259 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 CACNG5Q9UF02 275 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 LOC102723996A0A087X1L8 192 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV4A0A0B4J268 109 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 A0A1B0GXF2 115 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 NCBP2LA6PVI3 153 aaKnown RBP3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 C15orf62A8K5M9 175 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ATOX1O00244 68 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ENSAO43768 121 aaKnown RBP3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SPINK4O60575 86 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 RBP4P02753 201 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 COX7CP15954 63 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 PSMB2P49721 201 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 FXYD2P54710 66 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 PLGLB1Q02325 96 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 RIGQ13278 110 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 VGLL4Q14135 290 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 LY6KQ17RY6 165 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ANXA2RQ3ZCQ2 193 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 TMEM170BQ5T4T1 132 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 Q6YL49 198 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SIGLEC15Q6ZMC9 328 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ACP7Q6ZNF0 438 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 Q6ZSR3 168 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 MARCH3Q86UD3 253 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 NFE4Q86UQ8 179 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SFTPA2Q8IWL1 248 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SFTPA1Q8IWL2 248 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SLC22A18ASQ8N1D0 253 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 SNRNP40Q96DI7 357 aaKnown RBP3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZC2HC1AQ96GY0 325 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 CARD19Q96LW7 228 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 EDA2RQ9HAV5 297 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 PLEKHA3Q9HB20 300 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 TAC3Q9UHF0 121 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 PILRAQ9UKJ1 303 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 COL4A1P02462 1669 aa3.86□□□□□ -1.79
HMGB1P19-201ENST00000517578 POLR2AP24928 1970 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 PAPPA2Q9BXP8 1791 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRBV25-1A0A075B6N4 114 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 H3BP45 60 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 NBR2O15453 112 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZIC3O60481 467 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 HBDP02042 147 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 IAPPP10997 89 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 PLA2G5P39877 138 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 UBE2L3P68036 154 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 MRPS21P82921 87 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 MZT1Q08AG7 82 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 ARL16Q0P5N6 197 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 C1orf61Q13536 156 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 CST6Q15828 149 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 FHL5Q5TD97 284 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRPT1Q86TN4 253 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM57AQ8TBR7 257 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGFBPL1Q8WX77 278 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 ELSPBP1Q96BH3 223 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 DPH3Q96FX2 82 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 Q96MF0 132 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 SMIM14Q96QK8 99 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 SRSF8Q9BRL6 282 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 SIRPDQ9H106 197 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 JPT2Q9H910 190 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM60AQ9NP50 221 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 FANCMQ8IYD8 2048 aa3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 NCOA6Q14686 2063 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P19-201ENST00000517578 RALGAPA1Q6GYQ0 2036 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGKV1D-42A0A075B6H8 117 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGKV1D-8A0A087WSZ0 117 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRBV6-6A0A0A6YYG2 114 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV8-1A0A0A6YYK1 113 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 LOC107984156A0A0G2JMH3 177 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 LOC107984640A0A0U1RRK4 108 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 A0A1W2PR77 199 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 HIGD1CA8MV81 97 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 MS4A18H0YCH9 400 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 K7ENP7 123 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 HSPB6O14558 160 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 OVOL1O14753 267 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 MGST3O14880 152 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ACTL6BO94805 426 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 PSMB8P28062 276 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 DSCR4P56555 118 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 CLDN2P57739 230 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 UBE2D3P61077 147 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 UBE2D2P62837 147 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 OR1C1Q15619 314 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 IZUMO4Q1ZYL8 232 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms