RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	PPP1R14B	Q96C90	147 aa		11.06	□□□□□ -0.64
LMNA-223	ENST00000515459	SCRT2	Q9NQ03	307 aa		11.06	□□□□□ -0.64
LMNA-223	ENST00000515459	IGKV1D-37	A0A075B6S9	117 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	SNRPGP15	A8MWD9	76 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459		F5H768	121 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	DEFB130B	P0DP73	79 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	DEFB130A	P0DP74	79 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	MEOX2	P50222	304 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	VBP1	P61758	197 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	GAMT	Q14353	236 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	SURF2	Q15527	256 aa	Predicted RBP	11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	GPR107	Q5VW38	600 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	STEAP1B	Q6NZ63	245 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	AMTN	Q6UX39	209 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	LGI3	Q8N145	548 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	C15orf40	Q8WUR7	153 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	SLC35E1	Q96K37	410 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	C16orf92	Q96LL3	132 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	TMEM56-RWDD3	S4R434	201 aa		11.05	□□□□□ -0.64
LMNA-223	ENST00000515459	CRYM-AS1	A6NIL9	109 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459		A8MTW9	85 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	GABARAP	H6UMI1	98 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	GABARAP	O95166	117 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	GPX4	P36969	197 aa	Predicted RBP	11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	SPATA12	Q7Z6I5	190 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	DTD1	Q8TEA8	209 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	C20orf173	Q96LM9	149 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	EXTL2	Q9UBQ6	330 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	HSPB7	Q9UBY9	170 aa		11.04	□□□□□ -0.64
LMNA-223	ENST00000515459	INS	P01308	110 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	PRM2	P04554	102 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	TSPO	P30536	169 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	ATP5I	P56385	69 aa	Predicted RBP	11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	B2M	P61769	119 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	OR2F1	Q13607	317 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	FAAP20	Q6NZ36	180 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	AP3S1	Q92572	193 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	IL22RA2	Q969J5	263 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	FUNDC2	Q9BWH2	189 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	RBKS	Q9H477	322 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	LINC00588	Q9Y4M8	146 aa		11.03	□□□□□ -0.64
LMNA-223	ENST00000515459	LRP1B	Q9NZR2	4599 aa		11.02	□□□□□ -0.64
LMNA-223	ENST00000515459		A0A087WXM4	84 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	ATP5G1	P05496	136 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	GALR1	P47211	349 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	ATP5G3	P48201	142 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	CCR6	P51684	374 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	SPINK13	Q1W4C9	94 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	OR11H7	Q8NGC8	314 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	OR4C16	Q8NGL9	310 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	TRGV9	Q99603	122 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	GPR132	Q9UNW8	380 aa		11.02	□□□□□ -0.65
LMNA-223	ENST00000515459	DISC1	C4P0D8	188 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459		M0R2Z0	102 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	CRX	O43186	299 aa	Predicted RBP	11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	DUSP14	O95147	198 aa	Known RBP	11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	CNN1	P51911	297 aa	Known RBP	11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	SSBP1	Q04837	148 aa	Known RBP	11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	SMCO1	Q147U7	214 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	RSG1	Q9BU20	258 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	SLC25A32	Q9H2D1	315 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	SLC25A22	Q9H936	323 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	KCNIP3	Q9Y2W7	256 aa		11.01	□□□□□ -0.65
LMNA-223	ENST00000515459	CBY3	A6NI87	242 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	CLINT1	Q14677	625 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	FCN2	Q15485	313 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	SSX7	Q7RTT5	188 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	GPR141	Q7Z602	305 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	RNF141	Q8WVD5	230 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459	PRR13	Q9NZ81	148 aa		11	□□□□□ -0.65
LMNA-223	ENST00000515459		A0A0B4J2A0	478 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	PLAC8L1	A1L4L8	177 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	CFD	P00746	253 aa	Predicted RBP	10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	AZU1	P20160	251 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	GGNBP1	Q5YKI7	109 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	BAP18	Q8IXM2	172 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	C17orf77	Q96MU5	243 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459		Q9H8V8	135 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	SHPK	Q9UHJ6	478 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	SLC45A2	Q9UMX9	530 aa		10.99	□□□□□ -0.65
LMNA-223	ENST00000515459	IGKV1OR2-108	A0A075B7D4	117 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	ZNF98	A6NK75	572 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	ZNF182	P17025	639 aa	Predicted RBP	10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	RAB11A	P62491	216 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	MRPS10	P82664	201 aa	Known RBP	10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	TTC32	Q5I0X7	151 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	LYZL2	Q7Z4W2	148 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	THAP8	Q8NA92	274 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	OR4D5	Q8NGN0	318 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	OR1B1	Q8NGR6	318 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	GPR82	Q96P67	336 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	PRRT1	Q99946	306 aa		10.98	□□□□□ -0.65
LMNA-223	ENST00000515459	TRAV12-2	A0A075B6T6	113 aa		10.97	□□□□□ -0.65
LMNA-223	ENST00000515459	AKAIN1	P0CW23	69 aa		10.97	□□□□□ -0.65
LMNA-223	ENST00000515459	IGFL4	Q6B9Z1	124 aa		10.97	□□□□□ -0.65
LMNA-223	ENST00000515459	OR1S1	Q8NH92	325 aa		10.97	□□□□□ -0.65
LMNA-223	ENST00000515459	LINC01587	Q99440	93 aa		10.97	□□□□□ -0.65
LMNA-223	ENST00000515459	BOLA2-SMG1P6	H3BVE0	249 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms