RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 BPTFQ12830 3046 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGHV3-16A0A0C4DH30 117 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 KLF7O75840 302 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF136P52737 540 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 BSPH1Q075Z2 132 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 YPEL4Q96NS1 127 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
TRAPPC11-209ENST00000512476 CEP290O15078 2479 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 LAMA3Q16787 3333 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 A0A0G2JND7 137 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PITX3O75364 302 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 SLC25A14O95258 325 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PRSS2P07478 247 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 TPPP2P59282 170 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 C9orf66Q5T8R8 295 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 CSNK1G2-AS1Q8NCQ2 148 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF184Q99676 751 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 GINS4Q9BRT9 223 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 POLR2J2Q9GZM3 115 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PARLQ9H300 379 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PLEKHF2Q9H8W4 249 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 MDFICQ9P1T7 246 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 FUT9Q9Y231 359 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 FIS1Q9Y3D6 152 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PDE4DIPQ5VU43 2346 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 TRAV9-1A0A075B6T8 112 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 FAM181BA6NEQ2 426 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGKV1-39P01597 117 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGKV1-5P01602 117 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGKV1D-39P04432 117 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 LINC01547P58512 204 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 KRTAP27-1Q3LI81 207 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF678Q5SXM1 525 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 C1orf140Q5VVS0 124 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 FOXI2Q6ZQN5 318 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 LINC00305Q7Z4B0 112 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 GTSCR1Q86UQ5 136 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 VSIG2Q96IQ7 327 aa4.6□□□□□ -1.67
TRAPPC11-209ENST00000512476 ARRDC5A6NEK1 342 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGLL5B9A064 214 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 SOD1P00441 154 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 PSMB8P28062 276 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 CRISP3P54108 245 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 TMBIM6P55061 237 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 LINC00310P59036 64 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 DPTQ07507 201 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 FHL2Q14192 279 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 RSPO1Q2MKA7 263 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 FAM53AQ6NSI3 398 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF705AQ6ZN79 300 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF497Q6ZNH5 498 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 RPS27LQ71UM5 84 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 PDPNQ86YL7 162 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF555Q8NEP9 628 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 FAM57AQ8TBR7 257 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 CELA1Q9UNI1 258 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZFC3H1O60293 1989 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 REV3LO60673 3130 aa4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 TNRC18O15417 2968 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-209ENST00000512476 TLCD2A6NGC4 264 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 A8MWV9 139 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 OOSP1A8MZH6 123 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 BUB1B-PAK6H3BSN5 160 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 MRPS21P82921 87 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 MDP1Q86V88 176 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 SPIN2AQ99865 258 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 SPIN2BQ9BPZ2 258 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF471Q9BX82 626 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 FKBP11Q9NYL4 201 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF407Q9C0G0 2248 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 CACNA1IQ9P0X4 2223 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 A0A087WW49 117 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 A0A1W2PRS3 328 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 COX7A1P24310 79 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 CA7P43166 264 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 NMUP48645 174 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 CLLU1Q5K131 121 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 PYGO2Q9BRQ0 406 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 FGF23Q9GZV9 251 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 MOB4Q9Y3A3 225 aa4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 MRPS16Q9Y3D3 137 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-209ENST00000512476 IGHV7-81A0A0B4J1V7 117 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 CD300LBA8K4G0 201 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 LTAP01374 205 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 PGAM2P15259 253 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF93P35789 620 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 LCA10Q71F78 164 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 H3BMG7 143 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF705DP0CH99 300 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 NUP37Q8NFH4 326 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 COX14Q96I36 57 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 REG4Q9BYZ8 158 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 ZNF586Q9NXT0 402 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 LAMTOR3Q9UHA4 124 aa4.57□□□□□ -1.68
TRAPPC11-209ENST00000512476 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms