RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 CEACAM3P40198 252 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 ZNF134P52741 427 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 ID3Q02535 119 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 MEF2CQ06413 473 aaPredicted RBP7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 C17orf58Q2M2W7 97 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 RUSC1-AS1Q66K80 236 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 KIR3DL3Q8N743 410 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 FAM216AQ8WUB2 273 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 ZNF355PQ9NSJ1 428 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 LINC00312Q9Y6C7 94 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 TANC2Q9HCD6 1990 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 A0A1B0GW64 132 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 H3BTX0 84 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 CORTO00230 105 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 RRHO14718 337 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 PAX1P15863 534 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 ANXA2RQ3ZCQ2 193 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 DUX5Q96PT3 197 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM250H0YL14 139 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 SCGB2A1O75556 95 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 NMUP48645 174 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 PSG5Q15238 335 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 MORN2Q502X0 79 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 COA6Q5JTJ3 125 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 LCNL1Q6ZST4 164 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 DRAM1Q8N682 238 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 OR8A1Q8NGG7 326 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 SEPSECSQ9HD40 501 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 TRBV20OR9-2A0A075B6H5 130 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 UBE2G1P62253 170 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 SERF2P84101 59 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 LRRC75BQ2VPJ9 315 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 RPEQ96AT9 228 aa7.01□□□□□ -1.29
LIMCH1-209ENST00000509277 IGHV1-8P0DP01 117 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 RPL15P61313 204 aaKnown RBP7□□□□□ -1.29
LIMCH1-209ENST00000509277 PLGLAQ15195 96 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 LINC00173Q6ZV60 143 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 H2BFWTQ7Z2G1 175 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 ODF3L1Q8IXM7 274 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
LIMCH1-209ENST00000509277 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
LIMCH1-209ENST00000509277 SOX21Q9Y651 276 aaPredicted RBP7□□□□□ -1.29
LIMCH1-209ENST00000509277 C15orf65H3BRN8 121 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 RAMP3O60896 148 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 FOXH1O75593 365 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 AZU1P20160 251 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 LMO4P61968 165 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 SCGB2A2Q13296 93 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM155Q4W5P6 130 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 SPATA31B1PQ5VZV4 182 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 PRSS57Q6UWY2 283 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 FER1L6-AS1Q8NA97 138 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 LINC00479Q96M42 142 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 S1PR3Q99500 378 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 SAA2-SAA4A0A096LPE2 208 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 LOC389332A0A1B0GUA5 103 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 C17orf112F2Z3M2 114 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 SAA2P0DJI9 122 aaPredicted RBP7□□□□□ -1.29
LIMCH1-209ENST00000509277 HTR1DP28221 377 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 BMI1P35226 326 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 CENPWQ5EE01 88 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 CFAP161Q6P656 301 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 C19orf35Q6ZS72 473 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 PIP4P2Q8N4L2 257 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 OR4A5Q8NH83 315 aa7□□□□□ -1.29
LIMCH1-209ENST00000509277 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 HELTA6NFD8 242 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 CNIH1O95406 144 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 RAB9BQ9NP90 201 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 GCSHP23434 173 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 LINC00310P59036 64 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 RPL30P62888 115 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 LY6EQ16553 131 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 BPIFA4PQ86YQ2 179 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 SMR3AQ99954 134 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM133Q9H2Q1 129 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 TRAV26-1A0A087WT03 109 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 IGHV2-26A0A0B4J1V2 119 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 C17orf98A8MV24 154 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 K7EQM0 130 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 HIST1H1EP10412 219 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 VWC2Q2TAL6 325 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 NMSQ5H8A3 153 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 MBD3L1Q8WWY6 194 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 MRPL20Q9BYC9 149 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 JPT1Q9UK76 154 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms