RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PGPA6NDG6 321 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 MRPS12O15235 138 aaKnown RBP13.85□□□□□ -0.19
SFXN1-208ENST00000507823 NDUFB8O95169 186 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 IGHV1-69P01742 117 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 RPEL1Q2QD12 228 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 LEMD1Q68G75 181 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 ATG101Q9BSB4 218 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 OTORQ9NRC9 128 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 ZNF586Q9NXT0 402 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 RNF24Q9Y225 148 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 VN1R17PQ8TDU5 208 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 BLNKQ8WV28 456 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 GNG7O60262 68 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 SLC25A5P05141 298 aaKnown RBP13.84□□□□□ -0.19
SFXN1-208ENST00000507823 ATP5J2P56134 94 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 MEGF9Q9H1U4 602 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 Q9H3A6 140 aa13.84□□□□□ -0.19
SFXN1-208ENST00000507823 IGLC2P0DOY2 106 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 GFI1BQ5VTD9 330 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 S100A7AQ86SG5 101 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 BAGE2Q86Y30 109 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 TMEM183AQ8IXX5 376 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 MBD6Q96DN6 1003 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 MLST8Q9BVC4 326 aa13.83□□□□□ -0.19
SFXN1-208ENST00000507823 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.19
SFXN1-208ENST00000507823 GAR1Q9NY12 217 aaKnown RBP13.83□□□□□ -0.19
SFXN1-208ENST00000507823 SMIM27A0A1W2PRY6 76 aa13.83□□□□□ -0.2
SFXN1-208ENST00000507823 GNG5P63218 68 aa13.83□□□□□ -0.2
SFXN1-208ENST00000507823 IBA57Q5T440 356 aaKnown RBP13.83□□□□□ -0.2
SFXN1-208ENST00000507823 BBC3Q96PG8 261 aaPredicted RBP13.83□□□□□ -0.2
SFXN1-208ENST00000507823 SPTAN1Q13813 2472 aaKnown RBP13.82□□□□□ -0.2
SFXN1-208ENST00000507823 IGHV4-30-2A0A087WSY4 118 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 TRBV9A0A0B4J1U6 114 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 C5orf56Q8N8D9 126 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 TRAPPC1Q9Y5R8 145 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 TRBV6-1A0A0K0K1D8 114 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 TCRAP04437 139 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 IL4P05112 153 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 BPIFA4PQ86YQ2 179 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 FMC1Q96HJ9 113 aa13.82□□□□□ -0.2
SFXN1-208ENST00000507823 CRIP2P52943 208 aaPredicted RBP13.81□□□□□ -0.2
SFXN1-208ENST00000507823 DSCR9P59020 149 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 USF2Q15853 346 aaPredicted RBP13.81□□□□□ -0.2
SFXN1-208ENST00000507823 PIFOQ8TCI5 191 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 GPR61Q9BZJ8 451 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 TRAV34A0A0B4J273 112 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 OR2J3O76001 311 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 GPR82Q96P67 336 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 FLNCQ14315 2725 aa13.81□□□□□ -0.2
SFXN1-208ENST00000507823 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 LTAP01374 205 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 CTSGP08311 255 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 MGST1P10620 155 aaKnown RBP13.8□□□□□ -0.2
SFXN1-208ENST00000507823 ZNF414Q96IQ9 312 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 FBXL7Q9UJT9 491 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
SFXN1-208ENST00000507823 Q56UQ5 140 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 C19orf54Q5BKX5 351 aa13.8□□□□□ -0.2
SFXN1-208ENST00000507823 ASH1LQ9NR48 2969 aaKnown RBP13.8□□□□□ -0.2
SFXN1-208ENST00000507823 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 S100A2P29034 98 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 UBE2G1P62253 170 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 COX19Q49B96 90 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 ZNF502Q8TBZ5 544 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 UNQ5815/PRO19632Q6UWF5 114 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 ZNF843Q8N446 348 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 OR4F17Q8NGA8 305 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 CHRDL1Q9BU40 450 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 MOB4Q9Y3A3 225 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 S4R3C0 116 aa13.79□□□□□ -0.2
SFXN1-208ENST00000507823 PDE6HQ13956 83 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 SIGLEC15Q6ZMC9 328 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 ZNF492Q9P255 531 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 PRB1P04280 392 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 MSMBP08118 114 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 RPL19P84098 196 aaKnown RBP13.78□□□□□ -0.2
SFXN1-208ENST00000507823 NHLRC2Q8NBF2 726 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 HIST1H2BLQ99880 126 aa13.78□□□□□ -0.2
SFXN1-208ENST00000507823 AMY1AP04745 511 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 ADMP35318 185 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 S100A12P80511 92 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 NUDT10Q8NFP7 164 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 NUDT11Q96G61 164 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 GRAMD2BQ96HH9 432 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.2
SFXN1-208ENST00000507823 TRAV40A0A0B4J280 105 aa13.77□□□□□ -0.21
SFXN1-208ENST00000507823 H3BTX0 84 aa13.77□□□□□ -0.21
SFXN1-208ENST00000507823 IGLV2-11P01706 119 aa13.77□□□□□ -0.21
SFXN1-208ENST00000507823 SRSF1Q07955 248 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■□□□□ 10.3
SFXN1-208ENST00000507823 BCL6BQ8N143 479 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-208ENST00000507823 ZNF705GA8MUZ8 300 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-208ENST00000507823 DNLZQ5SXM8 178 aa13.77□□□□□ -0.21
SFXN1-208ENST00000507823 ATP6V0BQ99437 205 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms