RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-208ENST00000506368 PLPPR2Q96GM1 343 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-208ENST00000506368 APC2O95996 2303 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 HOXC12P31275 282 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 C1orf229Q6ZS94 237 aaPredicted RBP12.81□□□□□ -0.36
SCLT1-208ENST00000506368 LINC00305Q7Z4B0 112 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 LINC00574Q9H8X3 128 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 TFF1P04155 84 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 TCRAP04437 139 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 CT45A6P0DMU7 189 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 CT45A5P0DMU8 189 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 CT45A7P0DMV0 189 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 IGHV1-2P23083 117 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 COL8A1P27658 744 aa12.8□□□□□ -0.36
SCLT1-208ENST00000506368 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
SCLT1-208ENST00000506368 ZCCHC24Q8N2G6 241 aaKnown RBP12.8□□□□□ -0.36
SCLT1-208ENST00000506368 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 GNG5P63218 68 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 ADAMTSL5Q6ZMM2 481 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 PRSS3P2Q8NHM4 247 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 SIGMAR1Q99720 223 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 MGAQ8IWI9 3026 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 ACACAQ13085 2346 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 CNTRLQ7Z7A1 2325 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 MYOD1P15172 320 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
SCLT1-208ENST00000506368 ZNF137PP52743 207 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
SCLT1-208ENST00000506368 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 BLNKQ8WV28 456 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 HIGD1BQ9P298 99 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
SCLT1-208ENST00000506368 SHISA9B4DS77 424 aa12.77□□□□□ -0.36
SCLT1-208ENST00000506368 H0Y8G0 127 aa12.77□□□□□ -0.36
SCLT1-208ENST00000506368 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.36
SCLT1-208ENST00000506368 UQCRFS1P47985 274 aa12.77□□□□□ -0.36
SCLT1-208ENST00000506368 Q6ZT83 130 aa12.77□□□□□ -0.36
SCLT1-208ENST00000506368 SMIM13P0DJ93 91 aa12.77□□□□□ -0.37
SCLT1-208ENST00000506368 MLANAQ16655 118 aa12.77□□□□□ -0.37
SCLT1-208ENST00000506368 IGF2-ASQ6U949 168 aa12.77□□□□□ -0.37
SCLT1-208ENST00000506368 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
SCLT1-208ENST00000506368 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
SCLT1-208ENST00000506368 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 PPIAL4GP0DN37 164 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 Q86TA4 180 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 TRGV9Q99603 122 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 MEOX1P50221 254 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 FABP6P51161 128 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 C3AR1Q16581 482 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
SCLT1-208ENST00000506368 URB1O60287 2271 aaKnown RBP12.76□□□□□ -0.37
SCLT1-208ENST00000506368 DSPP15924 2871 aaKnown RBP12.75□□□□□ -0.37
SCLT1-208ENST00000506368 ZNF207O43670 478 aaKnown RBP12.75□□□□□ -0.37
SCLT1-208ENST00000506368 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
SCLT1-208ENST00000506368 ZNF833PQ6ZTB9 187 aa12.75□□□□□ -0.37
SCLT1-208ENST00000506368 HES7Q9BYE0 225 aa12.75□□□□□ -0.37
SCLT1-208ENST00000506368 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-208ENST00000506368 WT1P19544 449 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-208ENST00000506368 ZNF138P52744 262 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 ATMQ13315 3056 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 CD300EQ496F6 205 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-208ENST00000506368 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 Q9H3A6 140 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 ANKRD11Q6UB99 2663 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-208ENST00000506368 F8W1H4 67 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 LHBP01229 141 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 IGHV3-13P01766 116 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 CSN3P07498 182 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 GP9P14770 177 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 CD24P25063 80 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 ABHD17AQ96GS6 310 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 THYN1Q9P016 225 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
SCLT1-208ENST00000506368 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 LYZL6O75951 148 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 HBDP02042 147 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 IGKV1-16P04430 117 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 HOXA4Q00056 320 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-208ENST00000506368 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 OR10W1Q8NGF6 305 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
SCLT1-208ENST00000506368 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms