RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CYB5BO43169 146 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 MFSD11O43934 449 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 PPBPP02775 128 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 FXYD2P54710 66 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 ERHP84090 104 aaKnown RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 NDUFA5Q16718 116 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 HCP5Q6MZN7 132 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 TMEM106AQ96A25 262 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 LYSMD1Q96S90 227 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 SERPINI1Q99574 410 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 SLC35A3Q9Y2D2 325 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 AMMECR1Q9Y4X0 333 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 KIF13BQ9NQT8 1826 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 ANKRD36BQ8N2N9 1353 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 ITSN1Q15811 1721 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 ATG2BQ96BY7 2078 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 WNK3Q9BYP7 1800 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 PCNTO95613 3336 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 A0A087X0T9 212 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 IGHV1-18A0A0C4DH31 117 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 RIIAD1A6NNX1 92 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 BANF1O75531 89 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 TMEM258P61165 79 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 SMIM5Q71RC9 77 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 Q8NDZ9 215 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 TEX47Q8TBZ9 253 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 DNAJC30Q96LL9 226 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 OSTCQ9NRP0 149 aa1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 CPSF1Q10570 1443 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-208ENST00000505553 PPLO60437 1756 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 C1orf196B1AJZ1 125 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 FNDC10F2Z333 226 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 TCL1BO95988 128 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 CBR1P16152 277 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 SUPT4H1P63272 117 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 KISS1Q15726 138 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 RRN3P1Q2M238 152 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 TMEM86AQ8N2M4 240 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 VPS8Q8N3P4 1428 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 FAM24BQ8N5W8 94 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 OR4X2Q8NGF9 303 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 PFN4Q8NHR9 129 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 PYDC1Q8WXC3 89 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 CKLFQ9UBR5 152 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 ZSWIM8A7E2V4 1837 aa1.98□□□□□ -2.09
TRAPPC13-208ENST00000505553 N4BP2Q86UW6 1770 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 KDM6AO15550 1401 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 A0A0D9SG52 128 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 MAP1LC3B2A6NCE7 125 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 METTL15P1P0C7V9 234 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 SRIP30626 198 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 SRP14P37108 136 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 EIF5AP63241 154 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 BCL2L15Q5TBC7 163 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 FAM27BQ5VT28 67 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 DPPA3Q6W0C5 159 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 SIGLECL1Q8N7X8 197 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 OR8D4Q8NGM9 314 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 PLEKHB2Q96CS7 222 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 MAP1LC3BQ9GZQ8 125 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 C5P01031 1676 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 CACNA1AO00555 2505 aa1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-208ENST00000505553 TIAM2Q8IVF5 1701 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 VIRMAQ69YN4 1812 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 SLX4Q8IY92 1834 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 USP54Q70EL1 1684 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 ADAMTS7Q9UKP4 1686 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 OR51F1A6NGY5 319 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 ZNF860A6NHJ4 632 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 TMEM212A6NML5 194 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 HMSDA8MTL9 139 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 TSTD3H0UI37 97 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 GGCTO75223 188 aaKnown RBP1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 PIAS1O75925 651 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 RELAQ04206 551 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 KHDC3LQ587J8 217 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 TMEM78Q5T7P6 136 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 DCUN1D2Q6PH85 259 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 Q6ZTI0 123 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 YPEL2Q96QA6 119 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 HIST1H2BLQ99880 126 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 OR2J1Q9GZK6 312 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 TMEM133Q9H2Q1 129 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 C19orf12Q9NSK7 152 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 LAMTOR3Q9UHA4 124 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 EPDR1Q9UM22 224 aa1.96□□□□□ -2.1
TRAPPC13-208ENST00000505553 LY75O60449 1722 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms