RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PATE2Q6UY27 113 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 IL34Q6ZMJ4 242 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 COMMD1Q8N668 190 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 GATAD1Q8WUU5 269 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 MBD3L1Q8WWY6 194 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 TMEM37Q8WXS4 190 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 RNF125Q96EQ8 232 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 UHRF2Q96PU4 802 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 ATP6V0BQ99437 205 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 C16orf95Q9H693 158 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 SEPSECSQ9HD40 501 aaKnown RBP7.22□□□□□ -1.25
TPM3-218ENST00000505010 DNAJC4Q9NNZ3 241 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 MED9Q9NWA0 146 aa7.22□□□□□ -1.25
TPM3-218ENST00000505010 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
TPM3-218ENST00000505010 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 NDUFA7O95182 113 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 OR2C1O95371 312 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 ARL14EPLP0DKL9 152 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 TAS2R45P59539 299 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 PLP1P60201 277 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 CCL20P78556 96 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 KHDC3LQ587J8 217 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 ZNF343Q6P1L6 599 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 ZNF491Q8N8L2 437 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 OR4F5Q8NH21 305 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 LYPD6BQ8NI32 183 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 MYOZ3Q8TDC0 251 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 MARC2Q969Z3 335 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 CITED4Q96RK1 184 aa7.21□□□□□ -1.26
TPM3-218ENST00000505010 TECRQ9NZ01 308 aaKnown RBP7.21□□□□□ -1.26
TPM3-218ENST00000505010 PUS1Q9Y606 427 aaKnown RBP eCLIP7.21□□□□□ -1.26
TPM3-218ENST00000505010 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 TRAV5A0A0B4J249 113 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 WI2-2373I1.2A0A1W2PRP0 233 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 OR7C2O60412 319 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 ATP6V1G1O75348 118 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 CXorf1O96002 111 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 IFNA1P01562 189 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 LGALS1P09382 135 aaKnown RBP7.2□□□□□ -1.26
TPM3-218ENST00000505010 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 C8orf88P0DMB2 117 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 KIAA0141Q14154 515 aaPredicted RBP7.2□□□□□ -1.26
TPM3-218ENST00000505010 USF2Q15853 346 aaPredicted RBP7.2□□□□□ -1.26
TPM3-218ENST00000505010 HAGHQ16775 308 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 FAM209BQ5JX69 171 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 TOMM20LQ6UXN7 152 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 RNF152Q8N8N0 203 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 LINC01006Q8NI28 216 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 UBE2E2Q96LR5 201 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 C20orf24Q9BUV8 137 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 SCRT1Q9BWW7 348 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 SLC25A2Q9BXI2 301 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 TMPRSS5Q9H3S3 457 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 GNG13Q9P2W3 67 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 PEF1Q9UBV8 284 aaKnown RBP7.2□□□□□ -1.26
TPM3-218ENST00000505010 RABAC1Q9UI14 185 aa7.2□□□□□ -1.26
TPM3-218ENST00000505010 RAB19A4D1S5 217 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 H3BRN7 92 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 BMPR1BO00238 502 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 GGCTO75223 188 aaKnown RBP7.19□□□□□ -1.26
TPM3-218ENST00000505010 GCHFRP30047 84 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
TPM3-218ENST00000505010 GUK1Q16774 197 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 LEMD1Q68G75 181 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 ZNF414Q96IQ9 312 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
TPM3-218ENST00000505010 EIF5A2Q9GZV4 153 aaKnown RBP7.19□□□□□ -1.26
TPM3-218ENST00000505010 TMEM231Q9H6L2 316 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 RNF114Q9Y508 228 aa7.19□□□□□ -1.26
TPM3-218ENST00000505010 LOC102723971A0A1B0GUV8 181 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 CLPSL1A2RUU4 121 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 NDUFA4O00483 81 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 ZNF207O43670 478 aaKnown RBP7.18□□□□□ -1.26
TPM3-218ENST00000505010 OR10J4P0C629 311 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 BCL2P10415 239 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 CD28P10747 220 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 S100A7P31151 101 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 PSMB3P49720 205 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 PPT1P50897 306 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 UBE2G2P60604 165 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 SRSF3P84103 164 aaKnown RBP7.18□□□□□ -1.26
TPM3-218ENST00000505010 TCTEX1D4Q5JR98 221 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 PQLC2Q6ZP29 291 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 S100A7AQ86SG5 101 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 C11orf44Q8N8P7 122 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 KLHL30-AS1Q8NEE0 82 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 WIPF2Q8TF74 440 aaPredicted RBP7.18□□□□□ -1.26
TPM3-218ENST00000505010 NARS2Q96I59 477 aaKnown RBP7.18□□□□□ -1.26
TPM3-218ENST00000505010 FAM167A-AS1Q96KT0 104 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 FAM210AQ96ND0 272 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 METTL26Q96S19 204 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 SHANK2-AS3Q9BTD1 123 aa7.18□□□□□ -1.26
TPM3-218ENST00000505010 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 572.2 ms