RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FOXL1Q12952 345 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 VAMP3Q15836 100 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 ZNF841Q6ZN19 808 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 EIF4EBP1Q13541 118 aaPredicted RBP10.83□□□□□ -0.68
GPC1-209ENST00000495100 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
GPC1-209ENST00000495100 UQCRFS1P47985 274 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 DDB2Q92466 427 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 BMPR1BO00238 502 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 SPRY2O43597 315 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 ORM1P02763 201 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 THBDP07204 575 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 TAS2R60P59551 318 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 CRYBG3Q68DQ2 2970 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 TMEM133Q9H2Q1 129 aa10.82□□□□□ -0.68
GPC1-209ENST00000495100 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
GPC1-209ENST00000495100 PRR20EP86478 221 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 PRR20CP86479 221 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 PRR20DP86480 221 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 PRR20BP86481 221 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 PRR20AP86496 221 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 PATE2Q6UY27 113 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 ZC2HC1AQ96GY0 325 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 ZNF785A8K8V0 405 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 LHBP01229 141 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 HIST1H1EP10412 219 aaKnown RBP10.81□□□□□ -0.68
GPC1-209ENST00000495100 WDR73Q6P4I2 378 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 OR4F17Q8NGA8 305 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 TMEM186Q96B77 213 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 TCRBV4S1A1TA0A5B7 111 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 hDV102S1A0JD36 115 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 CENPVQ7Z7K6 275 aaPredicted RBP10.81□□□□□ -0.68
GPC1-209ENST00000495100 PIP4P1Q86T03 277 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
GPC1-209ENST00000495100 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 CLEC7AQ9BXN2 247 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 A0A1W2PS18 150 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 UNQ5815/PRO19632Q6UWF5 114 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
GPC1-209ENST00000495100 OR8B3Q8NGG8 313 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 NDUFA4L2Q9NRX3 87 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 C22orf46C9J442 243 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 RPLP1P05386 114 aaKnown RBP10.8□□□□□ -0.68
GPC1-209ENST00000495100 RAB1CQ92928 201 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 FLNCQ14315 2725 aa10.8□□□□□ -0.68
GPC1-209ENST00000495100 HLA-DQA1P01909 254 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 VWC2Q2TAL6 325 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 DIRC2Q96SL1 478 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 SIAH2O43255 324 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
GPC1-209ENST00000495100 GPX1P07203 203 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 OR5AL1P0C617 328 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 C2orf83Q53S99 150 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 ASCL5Q7RTU5 278 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 PYGO2Q9BRQ0 406 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 BET1LQ9NYM9 111 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
GPC1-209ENST00000495100 IGHV1-3A0A0C4DH29 117 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
GPC1-209ENST00000495100 NPSP0C0P6 89 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 ZNF672Q499Z4 452 aaPredicted RBP10.79□□□□□ -0.68
GPC1-209ENST00000495100 TMEM75Q8N9X5 138 aa10.79□□□□□ -0.68
GPC1-209ENST00000495100 NCR2O95944 276 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 PTTG1IPP53801 180 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 CX3CL1P78423 397 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 GUSBP1Q15486 140 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 LY6EQ16553 131 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 TMEM219Q86XT9 240 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
GPC1-209ENST00000495100 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 NPIPB5A8MRT5 1133 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 LEPROTL1O95214 131 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 MC5RP33032 325 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 LINC00322Q6ZN03 302 aaPredicted RBP10.78□□□□□ -0.68
GPC1-209ENST00000495100 ZNF329Q86UD4 541 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 PARD6GQ9BYG4 376 aaPredicted RBP10.78□□□□□ -0.68
GPC1-209ENST00000495100 UFC1Q9Y3C8 167 aa10.78□□□□□ -0.68
GPC1-209ENST00000495100 FN1P02751 2386 aaKnown RBP10.77□□□□□ -0.68
GPC1-209ENST00000495100 A8MWL6 223 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 GPR183P32249 361 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 NHLH1Q02575 133 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 NIT1Q86X76 327 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 SIGLEC9Q9Y336 463 aa10.77□□□□□ -0.69
GPC1-209ENST00000495100 GOLT1BQ9Y3E0 138 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms