RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SH3BGRL2Q9UJC5 107 aa9.23□□□□□ -0.93
RFC4-214ENST00000494047 ZFP30Q9Y2G7 519 aa9.23□□□□□ -0.93
RFC4-214ENST00000494047 A1L4Q6 167 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 EREGO14944 169 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 CRYGBP07316 175 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 CD3EP07766 207 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 CCL3L1P16619 93 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 REG1BP48304 166 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 FXYD3Q14802 87 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 PLGLAQ15195 96 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 MRPL54Q6P161 138 aaKnown RBP9.22□□□□□ -0.93
RFC4-214ENST00000494047 PPP1R27Q86WC6 154 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 OR1B1Q8NGR6 318 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 CCL17Q92583 94 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
RFC4-214ENST00000494047 PRSS22Q9GZN4 317 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 MRPS16Q9Y3D3 137 aaKnown RBP9.22□□□□□ -0.93
RFC4-214ENST00000494047 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
RFC4-214ENST00000494047 IGHV2-26A0A0B4J1V2 119 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 NUPR1O60356 82 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 IGLV1-47P01700 117 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 TCRAP04437 139 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
RFC4-214ENST00000494047 GP9P14770 177 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 MYOD1P15172 320 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 GATA2P23769 480 aaPredicted RBP9.21□□□□□ -0.94
RFC4-214ENST00000494047 CTRLP40313 264 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 ADORA2A-AS1P86434 159 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 TNXAQ16473 311 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 SPATA45Q537H7 98 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 PATE2Q6UY27 113 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 OR4F17Q8NGA8 305 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 RPEQ96AT9 228 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 RASL11BQ9BPW5 248 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 FBXL7Q9UJT9 491 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 SIGLEC9Q9Y336 463 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 PAM16Q9Y3D7 125 aa9.21□□□□□ -0.94
RFC4-214ENST00000494047 YLPM1P49750 1951 aaKnown RBP9.21□□□□□ -0.94
RFC4-214ENST00000494047 PGPA6NDG6 321 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 CGB1A6NKQ9 187 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 M0R2Z0 102 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 CRXO43186 299 aaPredicted RBP9.2□□□□□ -0.94
RFC4-214ENST00000494047 HNRNPA3P51991 378 aaKnown RBP9.2□□□□□ -0.94
RFC4-214ENST00000494047 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
RFC4-214ENST00000494047 ZNF124Q15973 351 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 PSMG4Q5JS54 123 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 MOB3BQ86TA1 216 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 RPRMLQ8N4K4 120 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 IGFBPL1Q8WX77 278 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 TXN2Q99757 166 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 ALKBH7Q9BT30 221 aaPredicted RBP9.2□□□□□ -0.94
RFC4-214ENST00000494047 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 PKDREJQ9NTG1 2253 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
RFC4-214ENST00000494047 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 IGHV1-3A0A0C4DH29 117 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 C19orf71A6NCJ1 209 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 BUB1B-PAK6H3BSN5 160 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
RFC4-214ENST00000494047 LIPFP07098 398 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 THBDP07204 575 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 PYYP10082 97 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 ORM2P19652 201 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 TCL1AP56279 114 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 RIGQ13278 110 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 CCDC144NLQ6NUI1 221 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 OR8B3Q8NGG8 313 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 OR8B2Q96RD0 313 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 FAM103A1Q9BTL3 118 aaKnown RBP9.19□□□□□ -0.94
RFC4-214ENST00000494047 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 Q9H3A6 140 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
RFC4-214ENST00000494047 PLCE1Q9P212 2302 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 MAST4O15021 2626 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 TNCP24821 2201 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 M0R1W7 72 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 HAX1O00165 279 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 CHEK1O14757 476 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 DLEU1O43261 78 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 C3orf79P0CE67 100 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 IGLC2P0DOY2 106 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 IGLC3P0DOY3 106 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
RFC4-214ENST00000494047 CDKN1AP38936 164 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 SLAQ13239 276 aa9.18□□□□□ -0.94
RFC4-214ENST00000494047 UTF1Q5T230 341 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms