RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 YIPF6Q96EC8 236 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 C16orf92Q96LL3 132 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 MTFP1Q9UDX5 166 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
NUP50-218ENST00000493456 FAT1Q14517 4588 aa12.35□□□□□ -0.43
NUP50-218ENST00000493456 MYCBP2O75592 4640 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 IGKV1D-37A0A075B6S9 117 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
NUP50-218ENST00000493456 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 HPGDSO60760 199 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 BTF3P20290 206 aaKnown RBP12.34□□□□□ -0.43
NUP50-218ENST00000493456 CLINT1Q14677 625 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 TMEM268Q5VZI3 342 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 OR4D10Q8NGI6 311 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 OR52I2Q8NH67 350 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 C20orf173Q96LM9 149 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 Q9H8V8 135 aa12.34□□□□□ -0.43
NUP50-218ENST00000493456 GABARAPH6UMI1 98 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
NUP50-218ENST00000493456 GABARAPO95166 117 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 GPX4P36969 197 aaPredicted RBP12.33□□□□□ -0.44
NUP50-218ENST00000493456 GALR1P47211 349 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
NUP50-218ENST00000493456 TAS2R19P59542 299 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 GAMTQ14353 236 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 LGI3Q8N145 548 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
NUP50-218ENST00000493456 CBY3A6NI87 242 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 EPM2AB3EWF7 344 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 CRXO43186 299 aaPredicted RBP12.32□□□□□ -0.44
NUP50-218ENST00000493456 RAB3DO95716 219 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 KRTAP10-2P60368 255 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 MEF2DQ14814 521 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
NUP50-218ENST00000493456 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 GPR141Q7Z602 305 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 OR11H7Q8NGC8 314 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
NUP50-218ENST00000493456 Q9H3A6 140 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 TMEM56-RWDD3S4R434 201 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 VPS13BQ7Z7G8 4022 aa12.32□□□□□ -0.44
NUP50-218ENST00000493456 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 FAM25AB3EWG3 89 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 FAM25CB3EWG5 89 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 FAM25GB3EWG6 89 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 M0R2Z0 102 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 PRM2P04554 102 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
NUP50-218ENST00000493456 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 IL22RA2Q969J5 263 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 TRGV9Q99603 122 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 HSPB7Q9UBY9 170 aa12.31□□□□□ -0.44
NUP50-218ENST00000493456 A0A1W2PPQ1 181 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 CFDP00746 253 aaPredicted RBP12.3□□□□□ -0.44
NUP50-218ENST00000493456 MZT2AQ6P582 158 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 C15orf40Q8WUR7 153 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 SLC25A32Q9H2D1 315 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 SLC45A2Q9UMX9 530 aa12.3□□□□□ -0.44
NUP50-218ENST00000493456 CCR6P51684 374 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 OR2F1Q13607 317 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 FCN2Q15485 313 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 C16orf74Q96GX8 76 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 KRTAP1-5Q9BYS1 174 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 RBKSQ9H477 322 aa12.29□□□□□ -0.44
NUP50-218ENST00000493456 AZU1P20160 251 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 NCS1P62166 190 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 SMCO1Q147U7 214 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 OR4D5Q8NGN0 318 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 OR1B1Q8NGR6 318 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 GPR82Q96P67 336 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 RSG1Q9BU20 258 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 SLC25A22Q9H936 323 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 EXTL2Q9UBQ6 330 aa12.28□□□□□ -0.44
NUP50-218ENST00000493456 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
NUP50-218ENST00000493456 ZNF98A6NK75 572 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 ATP6V1G2O95670 118 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 ZNF182P17025 639 aaPredicted RBP12.27□□□□□ -0.45
NUP50-218ENST00000493456 S100A7P31151 101 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 TAS2R60P59551 318 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 SSBP1Q04837 148 aaKnown RBP12.27□□□□□ -0.45
NUP50-218ENST00000493456 GGNBP1Q5YKI7 109 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 AP3S1Q92572 193 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 ZNF503Q96F45 646 aa12.27□□□□□ -0.45
NUP50-218ENST00000493456 C17orf77Q96MU5 243 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms