RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C5orf51A6NDU8 294 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 ZNF705EA8MWA4 302 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 CA1P00915 261 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 IFNA10P01566 189 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 HOXB5P09067 269 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 SPP1P10451 314 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 PSG1P11464 419 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 GAMTQ14353 236 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 GGNBP1Q5YKI7 109 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 MORN3Q6PF18 240 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 AKAP14Q86UN6 197 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 Q8NAQ8 132 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 PHLDA1Q8WV24 401 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 NARS2Q96I59 477 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 RAB40CQ96S21 281 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 HRH4Q9H3N8 390 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 RABAC1Q9UI14 185 aa7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 KLK5Q9Y337 293 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-210ENST00000490099 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 PRSS46E5RG02 174 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 ADAP1O75689 374 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 IL4P05112 153 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 GIPP09681 153 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 EIF2B2P49770 351 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 PMS2P11Q13670 270 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 FCN2Q15485 313 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 IAH1Q2TAA2 248 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 OR8G2PQ6IF36 304 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 STHQ8IWL8 128 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 STXBP6Q8NFX7 210 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 OR51G1Q8NGK1 321 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 ACY3Q96HD9 319 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 C2orf50Q96LR7 162 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 NMES1Q9C002 83 aa7.06□□□□□ -1.28
TMEM39A-210ENST00000490099 IGKV1OR2-108A0A075B7D4 117 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 KNCNA6PVL3 124 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 CCSO14618 274 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 PFDN1O60925 122 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 CCNKO75909 580 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 IFNA4P05014 189 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 PET100P0DJ07 73 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 RBMY1A1P0DJD3 496 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 RBMY1CP0DJD4 496 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 C4BPBP20851 252 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 RAP2BP61225 183 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 ID3Q02535 119 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 FGL1Q08830 312 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 RBMY1FQ15415 496 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 C1orf194Q5T5A4 169 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 OR11H7Q8NGC8 314 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 OR1S1Q8NH92 325 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 C11orf45Q8TAV5 145 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 TRGV9Q99603 122 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 MFFQ9GZY8 342 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 X6R8D5 127 aa7.05□□□□□ -1.28
TMEM39A-210ENST00000490099 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 H3BMM0 161 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 SOCS3O14543 225 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 MED6O75586 246 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 MIFP14174 115 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 CXCL3P19876 107 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 NANOS2P60321 138 aaKnown RBP7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 ZNF90Q03938 601 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 ZBTB8BQ8NAP8 495 aaPredicted RBP7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 GSKIPQ9P0R6 139 aa7.04□□□□□ -1.28
TMEM39A-210ENST00000490099 WRBO00258 174 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 SIX6O95475 246 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 LY6G6CO95867 125 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 RLN2P04090 185 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 NUP62P37198 522 aaPredicted RBP7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 NKX2-1P43699 371 aaPredicted RBP7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 H2BFSP57053 126 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 TCTAP57738 103 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 PSMG4Q5JS54 123 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 TCTE3Q8IZS6 198 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 C17orf77Q96MU5 243 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 CIB3Q96Q77 187 aaPredicted RBP7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 PFDN2Q9UHV9 154 aa7.03□□□□□ -1.28
TMEM39A-210ENST00000490099 IGHV4-28A0A0C4DH34 117 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 ZFP92A6NM28 416 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 DEFB4AO15263 64 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 SYNGR2O43760 224 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 SCGB1D2O95969 90 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 CFDP00746 253 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 FABP1P07148 127 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 PVALBP20472 110 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 SNRPD3P62318 126 aaKnown RBP7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 RAB11AP62491 216 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 OR4D5Q8NGN0 318 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 OR2T35Q8NGX2 323 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 PPP1R14BQ96C90 147 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms