RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 MPTX1A8MV57 137 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 PRSS46E5RG02 174 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 BUB3O43684 328 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 CA1P00915 261 aaPredicted RBP4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 IFNA21P01568 189 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 H2AFB1P0C5Y9 115 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 H2AFB2P0C5Z0 115 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 ZNF688P0C7X2 276 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 ATF4P18848 351 aaPredicted RBP4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 ANXA7P20073 488 aaKnown RBP4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 ID3Q02535 119 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 ZNF90Q03938 601 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 CNPY1Q3B7I2 92 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 C4orf46Q504U0 113 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 LEMD1Q68G75 181 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 SIGLEC15Q6ZMC9 328 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 MAPKAPK5-AS1Q8N8E1 139 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 TRGV9Q99603 122 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 PBDC1Q9BVG4 233 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 PFDN2Q9UHV9 154 aa4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
CTDSPL-208ENST00000486978 IGKV1OR2-108A0A075B7D4 117 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SCO2A0A1W2PP80 73 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 KNCNA6PVL3 124 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SNRPGP15A8MWD9 76 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 H3BP45 60 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 RTL8CO15255 209 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 PLA2G10O15496 165 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 LYRM1O43325 122 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 LYZP61626 148 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SNRPD3P62318 126 aaKnown RBP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 POLR2GP62487 172 aaKnown RBP eCLIP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SPANXN5Q5MJ07 72 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 MORN3Q6PF18 240 aaPredicted RBP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 TRPT1Q86TN4 253 aaKnown RBP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 TMEM217Q8N7C4 229 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 THAP8Q8NA92 274 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 OR4D5Q8NGN0 318 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 RARRES2Q99969 163 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 CCDC32Q9BV29 185 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 C20orf85Q9H1P6 137 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 NRN1Q9NPD7 142 aa4.69□□□□□ -1.66
CTDSPL-208ENST00000486978 SSSCA1O60232 199 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 CFDP00746 253 aaPredicted RBP4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 TCRBP04435 133 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 SPP1P10451 314 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 AKR1C1Q04828 323 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 OR2F1Q13607 317 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 IAH1Q2TAA2 248 aaPredicted RBP4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 TMEM41BQ5BJD5 291 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 PSMG4Q5JS54 123 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 C1orf194Q5T5A4 169 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 LINC00299Q6ZSB3 139 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 ACOT7LQ6ZUV0 252 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 MITD1Q8WV92 249 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 PPP1R14BQ96C90 147 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 SMIM8Q96KF7 97 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 RAB40CQ96S21 281 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 SSBP4Q9BWG4 385 aaPredicted RBP4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 C11orf68Q9H3H3 251 aaKnown RBP4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 PSENENQ9NZ42 101 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 FBXL17Q9UF56 701 aa4.68□□□□□ -1.66
CTDSPL-208ENST00000486978 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 SMCO3A2RU48 225 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 NUPR2A6NF83 97 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 PRSS29PA6NIE9 313 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 GIG44P09565 113 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 C4BPBP20851 252 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 PAX9P55771 341 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 TAS2R30P59541 319 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 DLK1P80370 383 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 ACTL10Q5JWF8 245 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 TMEM144Q7Z5S9 345 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 ZBTB8BQ8NAP8 495 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 BPIFCQ8NFQ6 507 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 ZNF431Q8TF32 576 aaPredicted RBP4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 S100ZQ8WXG8 99 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 NUDT15Q9NV35 164 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 GSKIPQ9P0R6 139 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 SLC45A2Q9UMX9 530 aa4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 RCL1Q9Y2P8 373 aaKnown RBP4.67□□□□□ -1.66
CTDSPL-208ENST00000486978 TRAV6A0A075B6T7 132 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 PMS2P5A8MQ11 134 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 FNDC10F2Z333 226 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 H3BMM0 161 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 SOCS3O14543 225 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 CCSO14618 274 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 TSC22D2O75157 780 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 CCNKO75909 580 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 MBPP02686 304 aaPredicted RBP4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 METTL15P1P0C7V9 234 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 HLA-DRB4P13762 266 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 ORM2P19652 201 aa4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 GATA2P23769 480 aaPredicted RBP4.66□□□□□ -1.66
CTDSPL-208ENST00000486978 S100A7P31151 101 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms