RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 MRPL27Q9P0M9 148 aaKnown RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 EPDR1Q9UM22 224 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 USP9XQ93008 2570 aaPredicted RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 ADMP35318 185 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 UBE2E1P51965 193 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 OR1L6Q8NGR2 347 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 SGK494Q96LW2 274 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 TMUB1Q9BVT8 246 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 LPAR2Q9HBW0 351 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 GSN-AS1Q9NRJ2 163 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 RPH3ALQ9UNE2 315 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 TBL2Q9Y4P3 447 aaKnown RBP10.25□□□□□ -0.77
SEC13-216ENST00000479868 CACNA1BQ00975 2339 aa10.25□□□□□ -0.77
SEC13-216ENST00000479868 CA1P00915 261 aaPredicted RBP10.24□□□□□ -0.77
SEC13-216ENST00000479868 AMBPP02760 352 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 SAA4P35542 130 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 TCL1AP56279 114 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 TTC9CQ8N5M4 171 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 Q9H3A6 140 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 CBY1Q9Y3M2 126 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 DOPEY1Q5JWR5 2465 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 IGHV7-81A0A0B4J1V7 117 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 A0A1B0GUS0 222 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 SPINK4O60575 86 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 FABP1P07148 127 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 IER3P46695 156 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 SLC35B1P78383 322 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 TMEM183BQ1AE95 376 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 Q8N9W7 124 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 FAM168AQ92567 244 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 SERTAD4Q9NUC0 356 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 ZNF586Q9NXT0 402 aa10.24□□□□□ -0.77
SEC13-216ENST00000479868 ZNF705GA8MUZ8 300 aaPredicted RBP10.23□□□□□ -0.77
SEC13-216ENST00000479868 EGR2P11161 476 aaPredicted RBP10.23□□□□□ -0.77
SEC13-216ENST00000479868 ZNF491Q8N8L2 437 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
SEC13-216ENST00000479868 SMIM27A0A1W2PRY6 76 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 TMEM8BA6NDV4 472 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 F8W735 103 aaPredicted RBP10.23□□□□□ -0.77
SEC13-216ENST00000479868 GNG7O60262 68 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 TOMM40O96008 361 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 IL4P05112 153 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 PCP4P48539 62 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 UBE2G1P62253 170 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 RNF125Q96EQ8 232 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
SEC13-216ENST00000479868 TMEM14CQ9P0S9 112 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
SEC13-216ENST00000479868 UTP20O75691 2785 aaKnown RBP10.22□□□□□ -0.77
SEC13-216ENST00000479868 PRR27Q6MZM9 219 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 BCL6BQ8N143 479 aaPredicted RBP10.22□□□□□ -0.77
SEC13-216ENST00000479868 HSPB9Q9BQS6 159 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 ATG101Q9BSB4 218 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 SHANK2-AS3Q9BTD1 123 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 C7orf69Q9H7B7 122 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 GRIFINA4D1Z8 144 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 H3BRN7 92 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 IGHV3-23P01764 117 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 CRYBG3Q68DQ2 2970 aa10.22□□□□□ -0.77
SEC13-216ENST00000479868 OR2J3O76001 311 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 NDUFB8O95169 186 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 TCRAP04437 139 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 RNF224P0DH78 156 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 HIST1H1EP10412 219 aaKnown RBP10.21□□□□□ -0.77
SEC13-216ENST00000479868 MFAP4P55083 255 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 FAM231DQ6ZW35 169 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 TMEM256Q8N2U0 113 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 NUDT11Q96G61 164 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 C17orf77Q96MU5 243 aa10.21□□□□□ -0.77
SEC13-216ENST00000479868 CELSR2Q9HCU4 2923 aa10.21□□□□□ -0.78
SEC13-216ENST00000479868 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.78
SEC13-216ENST00000479868 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
SEC13-216ENST00000479868 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.78
SEC13-216ENST00000479868 MBD6Q96DN6 1003 aa10.21□□□□□ -0.78
SEC13-216ENST00000479868 C21orf62Q9NYP8 219 aa10.21□□□□□ -0.78
SEC13-216ENST00000479868 CENPVL3A0A0U1RRI6 287 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 NPFFO15130 113 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 NUPR1O60356 82 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 HLA-DRB1P01911 266 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 Q56UQ5 140 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 GBGT1Q8N5D6 347 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 ZNF48Q96MX3 618 aaPredicted RBP10.2□□□□□ -0.78
SEC13-216ENST00000479868 GPR82Q96P67 336 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 CCL19Q99731 98 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 MLST8Q9BVC4 326 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
SEC13-216ENST00000479868 OTORQ9NRC9 128 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms