RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GSN-AS1Q9NRJ2 163 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 IGLV3-10A0A075B6K4 115 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 TCF15Q12870 199 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 HIKESHIQ53FT3 197 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 DEFB132Q7Z7B7 95 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 C20orf173Q96LM9 149 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 CACNA1EQ15878 2313 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 IGHV2-70P01814 119 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 CXCL10P02778 98 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 LOXL1Q08397 574 aaPredicted RBP4.53□□□□□ -1.68
USF3-202ENST00000478658 FGFBP3Q8TAT2 258 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 C8orf44Q96CB5 159 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 C18orf15Q96N68 181 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 SIGLEC7Q9Y286 467 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 RICTORQ6R327 1708 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 ZNF138P52744 262 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 NREPQ16612 68 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 TCF19Q9Y242 345 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 PRSS21Q9Y6M0 314 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 Q71RC1 249 aaPredicted RBP4.53□□□□□ -1.68
USF3-202ENST00000478658 LMO3Q8TAP4 145 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 SPACA5Q96QH8 159 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 CEP290O15078 2479 aa4.53□□□□□ -1.68
USF3-202ENST00000478658 SMIM27A0A1W2PRY6 76 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 C9JAW5 83 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 H3BUT2 72 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 FOXL1Q12952 345 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 NSUN5P1Q3KNT7 163 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 RNF125Q96EQ8 232 aa4.53□□□□□ -1.69
USF3-202ENST00000478658 TRAV8-3A0A0A6YYJ7 113 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 GAGE12BA1L429 117 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 FNDC10F2Z333 226 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 F5H768 121 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 LINC01619G3V211 115 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 ZNF883P0CG24 379 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 C5orf64Q2M2E5 130 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 COX20Q5RI15 118 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
USF3-202ENST00000478658 EAF1Q96JC9 268 aaPredicted RBP4.52□□□□□ -1.69
USF3-202ENST00000478658 PDLIM7Q9NR12 457 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 IGKV3-20P01619 116 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 BAALC-AS2P0C853 105 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 C5orf24Q7Z6I8 188 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 CCL13Q99616 98 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 TMEM196Q5HYL7 178 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 Q6ZT83 130 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 TTTY12Q9BZ98 90 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.52□□□□□ -1.69
USF3-202ENST00000478658 IGKV6D-41A0A0C4DH26 115 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 CCL25O15444 150 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 CRYGNQ8WXF5 182 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 HCFC1R1Q9NWW0 138 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 KLK9Q9UKQ9 250 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 SDK2Q58EX2 2172 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 GLI3P10071 1580 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 IGHV3-20A0A0C4DH32 117 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 WNT1P04628 370 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 UBE2D2P62837 147 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 RHOHQ15669 191 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 C12orf73Q69YU5 71 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 A0A1W2PRS3 328 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 YPEL3P61236 119 aaPredicted RBP4.52□□□□□ -1.69
USF3-202ENST00000478658 Q0VG73 95 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 STPG1Q5TH74 334 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 CLEC19AQ6UXS0 136 aa4.52□□□□□ -1.69
USF3-202ENST00000478658 MRPS18CQ9Y3D5 142 aaKnown RBP4.52□□□□□ -1.69
USF3-202ENST00000478658 CCL20P78556 96 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 NFE4Q86UQ8 179 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 NPWQ8N729 165 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 RASL10BQ96S79 203 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GTSF1LQ9H1H1 148 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 TMEM256-PLSCR3K7ERE1 68 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 DANCRP0C864 163 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 MYF5P13349 255 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 SPINK14Q6IE38 97 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 IGHV3OR15-7A0A075B7D8 119 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 FSHBP01225 129 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 IGHV1OR21-1A0A087WYE8 117 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GAGE7O76087 117 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GAGE12FP0CL80 117 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GAGE12GP0CL81 117 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GAGE12IP0CL82 117 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 PGFP49763 221 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 GFERP55789 205 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 RPS27LQ71UM5 84 aaKnown RBP4.51□□□□□ -1.69
USF3-202ENST00000478658 LY96Q9Y6Y9 160 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 MARF1Q9Y4F3 1742 aaKnown RBP4.51□□□□□ -1.69
USF3-202ENST00000478658 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 PRR19A6NJB7 356 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 H0YIZ8 118 aa4.51□□□□□ -1.69
USF3-202ENST00000478658 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms