RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 PSG5Q15238 335 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 FAM57AQ8TBR7 257 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 ZNF503Q96F45 646 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 CD24P25063 80 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 CAMPP49913 170 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 CFAP161Q6P656 301 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 SSX8Q7RTT4 187 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 PTPRZ1P23471 2315 aaPredicted RBP10.48□□□□□ -0.73
CCNL1-216ENST00000475298 CEP295Q9C0D2 2601 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 A6NJY4 79 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
CCNL1-216ENST00000475298 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 HILPDAQ9Y5L2 63 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
CCNL1-216ENST00000475298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.47□□□□□ -0.73
CCNL1-216ENST00000475298 A0A0G2JNJ9 132 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 FOXA3P55318 350 aaPredicted RBP10.47□□□□□ -0.73
CCNL1-216ENST00000475298 C3orf36Q3SXR2 165 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 CCDC144NLQ6NUI1 221 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 ZNF788Q6ZQV5 615 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 PRSS33Q8NF86 280 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 STXBP6Q8NFX7 210 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 RND1Q92730 232 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 Q9UFV3 132 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 A6NDN8 102 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 ACTL6BO94805 426 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 CKS1BP61024 79 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 RPL24P83731 157 aaKnown RBP10.47□□□□□ -0.73
CCNL1-216ENST00000475298 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 SLC25A10Q9UBX3 287 aaPredicted RBP10.47□□□□□ -0.73
CCNL1-216ENST00000475298 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
CCNL1-216ENST00000475298 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
CCNL1-216ENST00000475298 H0Y8G0 127 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 MC5RP33032 325 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 PRR20EP86478 221 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 PRR20CP86479 221 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 PRR20DP86480 221 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 PRR20BP86481 221 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 PRR20AP86496 221 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 FAM162BQ5T6X4 162 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.73
CCNL1-216ENST00000475298 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
CCNL1-216ENST00000475298 TSSC4Q9Y5U2 329 aaPredicted RBP10.46□□□□□ -0.73
CCNL1-216ENST00000475298 TRGV8A0A0C4DH27 118 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 FCN3O75636 299 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 CT45A6P0DMU7 189 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 CT45A5P0DMU8 189 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 CT45A7P0DMV0 189 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 HSPE1P61604 102 aaKnown RBP10.46□□□□□ -0.74
CCNL1-216ENST00000475298 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.74
CCNL1-216ENST00000475298 FAM231DQ6ZW35 169 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 RAB37Q96AX2 223 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 GRAMD2BQ96HH9 432 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 TMEM167BQ9NRX6 74 aa10.46□□□□□ -0.74
CCNL1-216ENST00000475298 FOXA2Q9Y261 457 aaPredicted RBP10.46□□□□□ -0.74
CCNL1-216ENST00000475298 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 CCL3L1P16619 93 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 FAM216AQ8WUB2 273 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 RELNP78509 3460 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 LIPFP07098 398 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 IGFBP2P18065 325 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 BSPH1Q075Z2 132 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 ADIPOQQ15848 244 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.45□□□□□ -0.74
CCNL1-216ENST00000475298 ENY2Q9NPA8 101 aa10.45□□□□□ -0.74
CCNL1-216ENST00000475298 RPUSD1Q9UJJ7 312 aaKnown RBP10.45□□□□□ -0.74
CCNL1-216ENST00000475298 ZNF207O43670 478 aaKnown RBP10.44□□□□□ -0.74
CCNL1-216ENST00000475298 THBDP07204 575 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 SLC25A48Q6ZT89 311 aaKnown RBP10.44□□□□□ -0.74
CCNL1-216ENST00000475298 C16orf97H3BN30 126 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 ZNF138P52744 262 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 TEX36Q5VZQ5 186 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 TEX45Q8NA69 505 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 NUP37Q8NFH4 326 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
CCNL1-216ENST00000475298 MLANAQ16655 118 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 PRR30Q53SZ7 412 aaPredicted RBP10.43□□□□□ -0.74
CCNL1-216ENST00000475298 TCTEX1D4Q5JR98 221 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 ATP5L2Q7Z4Y8 100 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 RAB9BQ9NP90 201 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 C17orf100A8MU93 164 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 PRRG2O14669 202 aa10.43□□□□□ -0.74
CCNL1-216ENST00000475298 NCR2O95944 276 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms