RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GAGE10A6NGK3 116 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 HMGB3O15347 200 aaKnown RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 CEACAM4O75871 244 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 HTR1DP28221 377 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 MFAP2P55001 183 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 FA2HQ7L5A8 372 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 NRACQ8N912 160 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 OR4C13Q8NGP0 309 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 MMABQ96EY8 250 aaPredicted RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 FNDC4Q9H6D8 234 aaPredicted RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 MRPL36Q9P0J6 103 aaKnown RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 A0A1W2PPC4 97 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 CA1P00915 261 aaPredicted RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 CKS1BP61024 79 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 RPS18P62269 152 aaKnown RBP3.21□□□□□ -1.9
USP16-205ENST00000474835 CD69Q07108 199 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 C3orf36Q3SXR2 165 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 Q56UQ5 140 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TRAT1Q6PIZ9 186 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 C10orf53Q8N6V4 93 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 FAM169BQ8N8A8 192 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 ZNRF2Q8NHG8 242 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 FOXB1Q99853 325 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 NABP2Q9BQ15 211 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TMEM191AQ9H0A3 160 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 COL12A1Q99715 3063 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TRBV25-1A0A075B6N4 114 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TRBV7-9A0A0J9YWB2 115 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 C8orf88P0DMB2 117 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TUBG1P23258 451 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 GPR12P47775 334 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 DLX6P56179 175 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 LINC00205P59089 165 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 Q0VFX4 171 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 SAMD5Q5TGI4 173 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TUSC5Q8IXB3 177 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 SYT8Q8NBV8 401 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 PERPQ96FX8 193 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 VPS25Q9BRG1 176 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 EPDR1Q9UM22 224 aa3.21□□□□□ -1.9
USP16-205ENST00000474835 H0Y8G0 127 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 MOSP00540 346 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 PCBD1P61457 104 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 FXYD3Q14802 87 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 CEACAM16Q2WEN9 425 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TMEM30BQ3MIR4 351 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 MBNL2Q5VZF2 373 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 BCL6BQ8N143 479 aaPredicted RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 OSR1Q8TAX0 266 aaPredicted RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 NANOS1Q8WY41 292 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 RNF183Q96D59 192 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 SPANXA1Q9NS26 97 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 HSPB8Q9UJY1 196 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 RNF24Q9Y225 148 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 DOCK10Q96BY6 2186 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 USF3Q68DE3 2245 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 UNC13CQ8NB66 2214 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 FAM240AA0A1B0GVK7 77 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TMEM150CB9EJG8 249 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 E7EUB6 86 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 LMO7DNF2Z398 122 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 K7EM74 188 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 UPK2O00526 184 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 IGHV3-13P01766 116 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 ADH4P08319 380 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 HIST1H1EP10412 219 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 RPL32P62910 135 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 VAMP3Q15836 100 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 APRG1Q8IVJ8 170 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 ADTRPQ96IZ2 230 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 FAM19A4Q96LR4 140 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 FAM103A1Q9BTL3 118 aaKnown RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 DUSP13Q9UII6 198 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 C3orf80F5H4A9 247 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 F8W735 103 aaPredicted RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 MYOD1P15172 320 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 UQCRFS1P47985 274 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 NMUP48645 174 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 GNG3P63215 75 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 PMP22Q01453 160 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 BEAN1Q3B7T3 259 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TMEM177Q53S58 311 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TMEM200BQ69YZ2 307 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 C1orf210Q8IVY1 113 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 OR10D3Q8NH80 312 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 ZNF296Q8WUU4 475 aaPredicted RBP3.2□□□□□ -1.9
USP16-205ENST00000474835 NPIPB3Q92617 1050 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 NRGNQ92686 78 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 BORCS7Q96B45 105 aa3.2□□□□□ -1.9
USP16-205ENST00000474835 TRGV9Q99603 122 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms