RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ACY3Q96HD9 319 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 VSIG2Q96IQ7 327 aa6.88□□□□□ -1.31
HDAC3-203ENST00000467533 FAM212BQ9NTI7 297 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-203ENST00000467533 TRAV18A0A075B6X5 111 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 EVI2AP22794 236 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 AKR1C2P52895 323 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 MLLT11Q13015 90 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-203ENST00000467533 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 OR8I2Q8N0Y5 310 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 PPP1R14DQ9NXH3 145 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
HDAC3-203ENST00000467533 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 SNURFLB1AK76 121 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 RFX2P48378 723 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 TAS2R20P59543 309 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 LYZP61626 148 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 RHOBP62745 196 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 GAMTQ14353 236 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 KIR3DS1Q14943 382 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 BSXQ3C1V8 233 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 SLC24A4Q8NFF2 622 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 NPIPB3Q92617 1050 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 S100A14Q9HCY8 104 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 RHBDL2Q9NX52 303 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
HDAC3-203ENST00000467533 K7EP13 123 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 IGKV1-5P01602 117 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 PMP2P02689 132 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 HTR2BP41595 481 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 ETFRF1Q6IPR1 90 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 DHRS11Q6UWP2 260 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 WFDC10BQ8IUB3 73 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 CCDC28AQ8IWP9 274 aa6.85□□□□□ -1.31
HDAC3-203ENST00000467533 RNASEH2CQ8TDP1 164 aaKnown RBP6.85□□□□□ -1.31
HDAC3-203ENST00000467533 H7BYZ3 331 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 NXPH3O95157 252 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 GALR1P47211 349 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 HIST1H1AQ02539 215 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-203ENST00000467533 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 OR5H2Q8NGV7 314 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 MGLLQ99685 303 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 SCN3BQ9NY72 215 aa6.84□□□□□ -1.31
HDAC3-203ENST00000467533 TRGV2A0A075B6R0 118 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 NOTOA8MTQ0 251 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 PAX4O43316 350 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 CRYGDP07320 174 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 C2orf83Q53S99 150 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 IGFL4Q6B9Z1 124 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 C22orf42Q6IC83 251 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 LPCAT3Q6P1A2 487 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 LYPD5Q6UWN5 251 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 Q6ZTI0 123 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 SPARTQ8N0X7 666 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 C10orf126Q8N4M7 172 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 RNF182Q8N6D2 247 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 LRTM2Q8N967 370 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 RNASE11Q8TAA1 199 aaKnown RBP6.83□□□□□ -1.32
HDAC3-203ENST00000467533 SLC25A32Q9H2D1 315 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 AUNIPQ9H7T9 357 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
HDAC3-203ENST00000467533 HEYLQ9NQ87 328 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-203ENST00000467533 TRAV5A0A0B4J249 113 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 ATG12O94817 140 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 GAS8-AS1O95177 125 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 CDKN1BP46527 198 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 TAS2R46P59540 309 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 RRNAD1Q96FB5 475 aaKnown RBP6.82□□□□□ -1.32
HDAC3-203ENST00000467533 RSG1Q9BU20 258 aa6.82□□□□□ -1.32
HDAC3-203ENST00000467533 OR5AC1P0C628 307 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 HNRNPA3P51991 378 aaKnown RBP6.81□□□□□ -1.32
HDAC3-203ENST00000467533 SPCS3P61009 180 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 RPL37AP61513 92 aaKnown RBP6.81□□□□□ -1.32
HDAC3-203ENST00000467533 ZNF90Q03938 601 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 FGL1Q08830 312 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 PACRGLQ8N7B6 248 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 SLC25A38Q96DW6 304 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 Q9HAA7 133 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 DIABLOQ9NR28 239 aa6.81□□□□□ -1.32
HDAC3-203ENST00000467533 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
HDAC3-203ENST00000467533 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 TRAV8-2A0A0B4J237 113 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 TRDV1A0A1B0GX56 115 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 A6NJ64 397 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 RGS10O43665 173 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 ZNF324O75467 553 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-203ENST00000467533 IGLV2-8P01709 118 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 FABP1P07148 127 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 TSPAN5P62079 268 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 OR2F1Q13607 317 aa6.8□□□□□ -1.32
HDAC3-203ENST00000467533 KLF9Q13886 244 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-203ENST00000467533 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
HDAC3-203ENST00000467533 TRIM16LQ309B1 348 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms