RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ZNF835Q9Y2P0 537 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 FAM215AQ9Y5M1 114 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 RHOGP84095 191 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 SLC25A34Q6PIV7 304 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 OR10X1Q8NGY0 326 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 NDFIP1Q9BT67 221 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 GFRA4Q9GZZ7 299 aa10.39□□□□□ -0.75
PDZRN3-205ENST00000466780 ABCA1O95477 2261 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 TRGV9Q99603 122 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 SCRT2Q9NQ03 307 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 RIF1Q5UIP0 2472 aaKnown RBP10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 ROS1P08922 2347 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 PVRIGQ6DKI7 326 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 CIARTQ8N365 385 aaPredicted RBP10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
PDZRN3-205ENST00000466780 MGAQ8IWI9 3026 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 OR2T8A6NH00 312 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 LIPFP07098 398 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 APELAP0DMC3 54 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 Q86TA4 180 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 GSX1Q9H4S2 264 aaPredicted RBP10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 ZNF785A8K8V0 405 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 CHEK1O14757 476 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 CD40P25942 277 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 FAM27E3Q08E93 113 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 TMEM186Q96B77 213 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
PDZRN3-205ENST00000466780 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 OR5AL1P0C617 328 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 VMA21Q3ZAQ7 101 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 PET117Q6UWS5 81 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 TMEM116Q8NCL8 245 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 IGHV3-72A0A0B4J1Y9 119 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 FAM231BA6NCW3 169 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 HAX1O00165 279 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 FOXE3Q13461 319 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 MAP1LC3CQ9BXW4 147 aa10.36□□□□□ -0.75
PDZRN3-205ENST00000466780 H0Y8G0 127 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 COL8A1P27658 744 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 LYPD2Q6UXB3 125 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 A0A087X0K7 114 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 CSN3P07498 182 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 PLP1P60201 277 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 RNF151Q2KHN1 245 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 NEU4Q8WWR8 484 aaPredicted RBP10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 CBY3A6NI87 242 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 HLA-DRB1P01911 266 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 PSG1P11464 419 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
PDZRN3-205ENST00000466780 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 TOX4O94842 621 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 CNTFRP26992 372 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 OTORQ9NRC9 128 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 DLX6P56179 175 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 TIMM8BQ9Y5J9 83 aaPredicted RBP10.34□□□□□ -0.75
PDZRN3-205ENST00000466780 C17orf100A8MU93 164 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 HTR1DP28221 377 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 RPL27AP46776 148 aaKnown RBP10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 ASCL2Q99929 193 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 CTSZQ9UBR2 303 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 HIGD1AQ9Y241 93 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 MC5RP33032 325 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 LDLRAD2Q5SZI1 272 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 C1orf185Q5T7R7 199 aa10.33□□□□□ -0.76
PDZRN3-205ENST00000466780 C2orf91Q6ZV80 131 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms