RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TAS2R45P59539 299 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 BRD3OSQ6XYD6 125 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 Q8N9W7 124 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 RNF2Q99496 336 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
HDAC6-213ENST00000462730 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
HDAC6-213ENST00000462730 PDE6DO43924 150 aa11.44□□□□□ -0.58
HDAC6-213ENST00000462730 IGHV4-38-2P0DP08 117 aa11.44□□□□□ -0.58
HDAC6-213ENST00000462730 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
HDAC6-213ENST00000462730 LINC01356Q8N9X3 169 aa11.44□□□□□ -0.58
HDAC6-213ENST00000462730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.589e-8■■■□□ 18
HDAC6-213ENST00000462730 CELSR1Q9NYQ6 3014 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 F6UZH7 168 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 M0R143 59 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 OR7C2O60412 319 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 C8orf88P0DMB2 117 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 LOXL1Q08397 574 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-213ENST00000462730 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 C10orf113Q5VZT2 155 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 MBD6Q96DN6 1003 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-213ENST00000462730 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 NPIPB5A8MRT5 1133 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 GATA3P23771 443 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 PATE2Q6UY27 113 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 PQLC2Q6ZP29 291 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 RASL11BQ9BPW5 248 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
HDAC6-213ENST00000462730 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-213ENST00000462730 K7EIM0 57 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 LINC00614P0C842 121 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-213ENST00000462730 Q96MF0 132 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 SLC25A2Q9BXI2 301 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 CR1P17927 2039 aa11.42□□□□□ -0.58
HDAC6-213ENST00000462730 KIR2DL5BA0A0G2JN68 375 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 KIR2DL5BA0A0G2JPC4 375 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 AVPP01185 164 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 HLA-DRB1P01911 266 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 GAGE1Q13065 139 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 KIR2DL5AQ8N109 375 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 OR1B1Q8NGR6 318 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 FAM167A-AS1Q96KT0 104 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 UHRF2Q96PU4 802 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF355PQ9NSJ1 428 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 SCO2A0A1W2PP80 73 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 OR10J4P0C629 311 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 ORM2P19652 201 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 CNN1P51911 297 aaKnown RBP11.41□□□□□ -0.58
HDAC6-213ENST00000462730 RANP62826 216 aaKnown RBP11.41□□□□□ -0.58
HDAC6-213ENST00000462730 TIGITQ495A1 244 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 TTC9CQ8N5M4 171 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 HSPB9Q9BQS6 159 aa11.41□□□□□ -0.58
HDAC6-213ENST00000462730 ZNF469Q96JG9 3925 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-213ENST00000462730 GCN1Q92616 2671 aaKnown RBP11.4□□□□□ -0.58
HDAC6-213ENST00000462730 A0A0U1RQK1 487 aa11.4□□□□□ -0.58
HDAC6-213ENST00000462730 NDUFB4O95168 129 aa11.4□□□□□ -0.58
HDAC6-213ENST00000462730 EGR2P11161 476 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-213ENST00000462730 RPL15P61313 204 aaKnown RBP11.4□□□□□ -0.58
HDAC6-213ENST00000462730 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
HDAC6-213ENST00000462730 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
HDAC6-213ENST00000462730 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-213ENST00000462730 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
HDAC6-213ENST00000462730 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 TRAV9-1A0A075B6T8 112 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 TGFAP01135 160 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 UBE2L3P68036 154 aaKnown RBP11.39□□□□□ -0.59
HDAC6-213ENST00000462730 PRSS57Q6UWY2 283 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 ZNF320A2RRD8 509 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 HYPMO75409 117 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 PAXXQ9BUH6 204 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 TRAPPC1Q9Y5R8 145 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 S4R3C0 116 aa11.39□□□□□ -0.59
HDAC6-213ENST00000462730 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
HDAC6-213ENST00000462730 PYYP10082 97 aa11.38□□□□□ -0.59
HDAC6-213ENST00000462730 LYZP61626 148 aa11.38□□□□□ -0.59
HDAC6-213ENST00000462730 FOXL1Q12952 345 aa11.38□□□□□ -0.59
HDAC6-213ENST00000462730 TMEM219Q86XT9 240 aa11.38□□□□□ -0.59
HDAC6-213ENST00000462730 SFRP2Q96HF1 295 aa11.38□□□□□ -0.59
HDAC6-213ENST00000462730 SOX21Q9Y651 276 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-213ENST00000462730 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms