RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 HIGD1AQ9Y241 93 aa7.18□□□□□ -1.26
PKP4-208ENST00000462335 COX7A2P2O60397 106 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 CCNKO75909 580 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 LINC00869P0C866 280 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 ATF4P18848 351 aaPredicted RBP7.17□□□□□ -1.26
PKP4-208ENST00000462335 CAMLGP49069 296 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 FGL1Q08830 312 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 C1orf194Q5T5A4 169 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 SAMD13Q5VXD3 122 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 C16orf54Q6UWD8 224 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 STHQ8IWL8 128 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 TMEM252Q8N6L7 170 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 GGTLC1Q9BX51 225 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 U3KQK5 164 aa7.17□□□□□ -1.26
PKP4-208ENST00000462335 IGKV1D-37A0A075B6S9 117 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 TRAV2A0A0B4J234 112 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 IGSF23A1L1A6 192 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 A8MZ25 164 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 AGPAT2O15120 278 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 BUB3O43684 328 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 MPC2O95563 127 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 IFNA5P01569 189 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
PKP4-208ENST00000462335 FGF7P21781 194 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
PKP4-208ENST00000462335 H2BFSP57053 126 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 DEFB131AP59861 70 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 APRG1Q8IVJ8 170 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 SBSPONQ8IVN8 264 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 OR1L4Q8NGR5 311 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 LINC00052Q96N35 136 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 GPR82Q96P67 336 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 NRN1Q9NPD7 142 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
PKP4-208ENST00000462335 IGKV1OR2-108A0A075B7D4 117 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
PKP4-208ENST00000462335 ZNF98A6NK75 572 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 PMS2P5A8MQ11 134 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 PRSS46E5RG02 174 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 MPDU1O75352 247 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 ZNF688P0C7X2 276 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 RPL7P18124 248 aaKnown RBP7.15□□□□□ -1.26
PKP4-208ENST00000462335 MEOX2P50222 304 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 EWSR1Q01844 656 aaKnown RBP eCLIP7.15□□□□□ -1.264e-7■■■□□ 15.3
PKP4-208ENST00000462335 NHLH2Q02577 135 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 CLINT1Q14677 625 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 HAGHQ16775 308 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 PSMG4Q5JS54 123 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 C10orf113Q5VZT2 155 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 FAM90A2PQ658T7 463 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 INO80EQ8NBZ0 244 aaPredicted RBP7.15□□□□□ -1.26
PKP4-208ENST00000462335 OR5C1Q8NGR4 320 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 ZNF414Q96IQ9 312 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 FAM110AQ9BQ89 295 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 RSG1Q9BU20 258 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 WFDC10AQ9H1F0 79 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 KCNIP2Q9NS61 270 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 OR5AC2Q9NZP5 309 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 U3KQE9 123 aa7.15□□□□□ -1.26
PKP4-208ENST00000462335 UBE2CO00762 179 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 RPL12P30050 165 aaKnown RBP7.14□□□□□ -1.27
PKP4-208ENST00000462335 ARL16Q0P5N6 197 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 IL15RAQ13261 267 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 FCN2Q15485 313 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 LEMD1Q68G75 181 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 GLMPQ8WWB7 406 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 ASB13Q8WXK3 278 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 PFDN5Q99471 154 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 DNAJC4Q9NNZ3 241 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 MBD2Q9UBB5 411 aa7.14□□□□□ -1.27
PKP4-208ENST00000462335 RBMY1BA6NDE4 496 aaKnown RBP7.13□□□□□ -1.27
PKP4-208ENST00000462335 RBMY1EA6NEQ0 496 aaKnown RBP7.13□□□□□ -1.27
PKP4-208ENST00000462335 K7EQG2 157 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 RBMY1DP0C7P1 496 aaKnown RBP7.13□□□□□ -1.27
PKP4-208ENST00000462335 B2MP61769 119 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 NUTF2P61970 127 aaKnown RBP7.13□□□□□ -1.27
PKP4-208ENST00000462335 ACTL10Q5JWF8 245 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 EBLN2Q6P2I7 272 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 LINC00305Q7Z4B0 112 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 SLC25A39Q9BZJ4 359 aaPredicted RBP7.13□□□□□ -1.27
PKP4-208ENST00000462335 SMIM3Q9BZL3 60 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 ARV1Q9H2C2 271 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 PPP1R14DQ9NXH3 145 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 WDR83OSQ9Y284 106 aa7.13□□□□□ -1.27
PKP4-208ENST00000462335 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
PKP4-208ENST00000462335 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
PKP4-208ENST00000462335 GIPP09681 153 aaPredicted RBP7.12□□□□□ -1.27
PKP4-208ENST00000462335 CXCL3P19876 107 aa7.12□□□□□ -1.27
PKP4-208ENST00000462335 ODF3L2Q3SX64 289 aa7.12□□□□□ -1.27
PKP4-208ENST00000462335 MIC13Q5XKP0 118 aa7.12□□□□□ -1.27
PKP4-208ENST00000462335 TMEM182Q6ZP80 229 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms