RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 LYPD2Q6UXB3 125 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRBV24-1A0A075B6N3 115 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 NDUFA3O95167 84 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 CXCL1P09341 107 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 ZNF524Q96C55 264 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 PTPRDP23468 1912 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 COLCA2A8K830 154 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 H0YJW9 148 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 GZMBP10144 247 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 MLANAQ16655 118 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 ASCL4Q6XD76 172 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 COL8A2P25067 703 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 LINC01551Q86U37 167 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 PEF1Q9UBV8 284 aaKnown RBP9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 FNDC1Q4ZHG4 1894 aaPredicted RBP9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 APOMO95445 188 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 C5orf64Q2M2E5 130 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 OR10J3Q5JRS4 329 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGKV1-16P04430 117 aa9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 SLC25A39Q9BZJ4 359 aaPredicted RBP9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
SMARCAD1-204ENST00000457823 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 H3BUX3 64 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 Q6ZS49 121 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 STHQ8IWL8 128 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 RPRMLQ8N4K4 120 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 SIGLEC9Q9Y336 463 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGKV2-40A0A087WW87 121 aaPredicted RBP9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 C15orf62A8K5M9 175 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGKV2D-40P01614 121 aaPredicted RBP9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 THSD7BQ9C0I4 1608 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 NOTCH4Q99466 2003 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGKV1-6A0A0C4DH72 117 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 ETV2O00321 342 aaPredicted RBP9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 DNAL4O96015 105 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 RNF5Q99942 180 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 ANKHD1Q8IWZ3 2542 aaKnown RBP9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 PPBPP02775 128 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 VCX2Q9H322 139 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 ST20Q9HBF5 79 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 U3KQA8 63 aa9.59□□□□□ -0.87
SMARCAD1-204ENST00000457823 MED13Q9UHV7 2174 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 OOSP1A8MZH6 123 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 HBDP02042 147 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 EVI2AP22794 236 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 MINOS1Q5TGZ0 78 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 HIST1H2BLQ99880 126 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 MINOS1-NBL1R4GNA1 71 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 NIT1Q86X76 327 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 B4DSR2 109 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 E7EQL1 145 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 TRGV9Q99603 122 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 TNCP24821 2201 aa9.58□□□□□ -0.88
SMARCAD1-204ENST00000457823 TRAV8-1A0A0A6YYK1 113 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 TCRAP04437 139 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 PRR30Q53SZ7 412 aaPredicted RBP9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 REG4Q9BYZ8 158 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 GLRX5Q86SX6 157 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 SRSF1Q07955 248 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 FOXL1Q12952 345 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 CACNG7P62955 275 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 UNQ6494/PRO21346Q6UXR6 183 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 FAM169BQ8N8A8 192 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 C1orf147Q96MC9 270 aaPredicted RBP9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 BPESC1Q9GZL8 116 aa9.57□□□□□ -0.88
SMARCAD1-204ENST00000457823 C19orf67A6NJJ6 358 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 F2Z2F3 143 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 OVOL1O14753 267 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 NDPQ00604 133 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 H3BRM9 83 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 SRSF4Q08170 494 aaKnown RBP9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 TYMSP04818 313 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
SMARCAD1-204ENST00000457823 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms