RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 A0A1W2PPI3 338 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 EREGO14944 169 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 LHFPL4Q7Z7J7 247 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 ASCL2Q99929 193 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 SLC50A1Q9BRV3 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PPBPP02775 128 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PRR20EP86478 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PRR20CP86479 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PRR20DP86480 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PRR20BP86481 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 PRR20AP86496 221 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 ZNF672Q499Z4 452 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-206ENST00000445265 ZNRD1Q9P1U0 126 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 GGTLC3B5MD39 225 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 ERASQ7Z444 233 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 ZNF502Q8TBZ5 544 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 HBDP02042 147 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 CD24P25063 80 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 LYPD2Q6UXB3 125 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 DPF1Q92782 380 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 MS4A6AQ9H2W1 248 aa13.5□□□□□ -0.25
TCOF1-206ENST00000445265 SNAI2O43623 268 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 PCP4P48539 62 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 DLX1P56177 255 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 LYPD1Q8N2G4 141 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 A6NNC1 897 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 BUB1B-PAK6H3BSN5 160 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 TDGF1P3P51864 188 aa13.49□□□□□ -0.25
TCOF1-206ENST00000445265 PLP1P60201 277 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 FAM231DQ6ZW35 169 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 FAM106AQ4KMX7 169 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 TPTE2P1Q5T6R2 138 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 TEX36Q5VZQ5 186 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 TRGV3P03979 118 aa13.48□□□□□ -0.25
TCOF1-206ENST00000445265 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 PDLIM4P50479 330 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 HIST1H1AQ02539 215 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-206ENST00000445265 EBLN2Q6P2I7 272 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 DUX4L9Q6RFH8 374 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-206ENST00000445265 SRSF8Q9BRL6 282 aaKnown RBP13.47□□□□□ -0.25
TCOF1-206ENST00000445265 LSM4Q9Y4Z0 139 aaKnown RBP13.47□□□□□ -0.25
TCOF1-206ENST00000445265 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 SMIM13P0DJ93 91 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 DGAT2L7PQ6IED9 249 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 C18orf32Q8TCD1 76 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 GFRA4Q9GZZ7 299 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 CLEC19AQ6UXS0 136 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
TCOF1-206ENST00000445265 IGHV3-66A0A0C4DH42 116 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 PSMB2P49721 201 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 SYT8Q8NBV8 401 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 OR11H1Q8NG94 326 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 OR11H2Q8NH07 326 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 NXT2Q9NPJ8 142 aaKnown RBP13.46□□□□□ -0.25
TCOF1-206ENST00000445265 TMEM160Q9NX00 188 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 CEACAM8P31997 349 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-206ENST00000445265 CT83Q5H943 113 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 Q6ZWC4 215 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 RPRMLQ8N4K4 120 aa13.46□□□□□ -0.25
TCOF1-206ENST00000445265 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 CDKN1AP38936 164 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 RPL15P61313 204 aaKnown RBP13.46□□□□□ -0.26
TCOF1-206ENST00000445265 Q6ZPA2 131 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 SLC25A2Q9BXI2 301 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 KLK15Q9H2R5 256 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 ZNF492Q9P255 531 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 OOSP1A8MZH6 123 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 CIDEAO60543 219 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 PPP1R17O96001 155 aa13.46□□□□□ -0.26
TCOF1-206ENST00000445265 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 IGLV2-14P01704 120 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 Q86TA4 180 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 DCAF16Q9NXF7 216 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 MMP23AO75900 390 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 THBDP07204 575 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 TDGF1P13385 188 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 SPACA3Q8IXA5 215 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 FOXC2Q99958 501 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 ALKBH7Q9BT30 221 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-206ENST00000445265 SPRY4Q9C004 299 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 ABCA4P78363 2273 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 TSPOP30536 169 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 SYS1-DBNDD2H3BUS1 97 aa13.45□□□□□ -0.26
TCOF1-206ENST00000445265 RHOGP84095 191 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 WT1-ASQ06250 92 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 C5orf64Q2M2E5 130 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 SMIM27A0A1W2PRY6 76 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 F2Z2F3 143 aa13.44□□□□□ -0.26
TCOF1-206ENST00000445265 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms